Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC14.39□□□□□ -0.11
Gli3Q61602 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Gli3Q61602 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gli3Q61602 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gli3Q61602 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gli3Q61602 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC14.39□□□□□ -0.11
Gli3Q61602 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC14.39□□□□□ -0.11
Gli3Q61602 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gli3Q61602 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Gli3Q61602 Mmel1-207ENSMUST00000163732 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gli3Q61602 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Gli3Q61602 Pdcd10-205ENSMUST00000161137 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gli3Q61602 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gli3Q61602 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gli3Q61602 Hmgn2-203ENSMUST00000102553 1265 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gli3Q61602 Scgb1b30-201ENSMUST00000108083 491 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Gli3Q61602 Cox4i2-202ENSMUST00000109821 733 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gli3Q61602 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gli3Q61602 Gm11827-201ENSMUST00000142297 1257 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gli3Q61602 Gm13056-201ENSMUST00000142429 564 ntTSL 2 BASIC14.39□□□□□ -0.11
Gli3Q61602 Gm16973-201ENSMUST00000180682 1299 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gli3Q61602 Gm4891-201ENSMUST00000182279 912 ntBASIC14.39□□□□□ -0.11
Gli3Q61602 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
Gli3Q61602 Spin3-ps-201ENSMUST00000192825 770 ntBASIC14.39□□□□□ -0.11
Gli3Q61602 Mpv17-204ENSMUST00000200864 878 ntAPPRIS P3 TSL 3 BASIC14.39□□□□□ -0.11
Gli3Q61602 Gm44659-201ENSMUST00000207269 436 ntTSL 2 BASIC14.39□□□□□ -0.11
Gli3Q61602 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gli3Q61602 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gli3Q61602 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Gli3Q61602 Mapk1ip1-202ENSMUST00000118810 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gli3Q61602 Gm45170-201ENSMUST00000206746 1671 ntBASIC14.38□□□□□ -0.11
Gli3Q61602 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gli3Q61602 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC14.38□□□□□ -0.11
Gli3Q61602 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
Gli3Q61602 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gli3Q61602 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gli3Q61602 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC14.38□□□□□ -0.11
Gli3Q61602 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC14.38□□□□□ -0.11
Gli3Q61602 Sav1-201ENSMUST00000021467 2524 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gli3Q61602 Nanog-201ENSMUST00000012540 2211 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gli3Q61602 Pfkfb3-215ENSMUST00000183869 1478 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gli3Q61602 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gli3Q61602 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gli3Q61602 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gli3Q61602 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gli3Q61602 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gli3Q61602 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gli3Q61602 Cox6c-201ENSMUST00000014457 503 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gli3Q61602 Gm11959-201ENSMUST00000148655 723 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gli3Q61602 Gm23497-201ENSMUST00000157738 130 ntBASIC14.38□□□□□ -0.11
Gli3Q61602 Gm16470-201ENSMUST00000182456 998 ntBASIC14.38□□□□□ -0.11
Gli3Q61602 Gm29388-201ENSMUST00000190718 284 ntTSL 3 BASIC14.38□□□□□ -0.11
Gli3Q61602 Gm8171-201ENSMUST00000217443 720 ntBASIC14.38□□□□□ -0.11
Gli3Q61602 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Gli3Q61602 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Gli3Q61602 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC14.38□□□□□ -0.11
Gli3Q61602 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Gli3Q61602 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Gli3Q61602 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Gli3Q61602 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gli3Q61602 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gli3Q61602 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gli3Q61602 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gli3Q61602 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC14.37□□□□□ -0.11
Gli3Q61602 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gli3Q61602 Nr1h4-202ENSMUST00000105296 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gli3Q61602 Nr1h4-201ENSMUST00000058126 1964 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gli3Q61602 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gli3Q61602 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gli3Q61602 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gli3Q61602 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.37□□□□□ -0.11
Gli3Q61602 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.37□□□□□ -0.11
Gli3Q61602 Olfr400-ps1-201ENSMUST00000118094 955 ntBASIC14.37□□□□□ -0.11
Gli3Q61602 Gm14856-201ENSMUST00000121548 613 ntBASIC14.37□□□□□ -0.11
Gli3Q61602 Gm22009-201ENSMUST00000158792 343 ntBASIC14.37□□□□□ -0.11
Gli3Q61602 Gm37678-201ENSMUST00000192908 1146 ntBASIC14.37□□□□□ -0.11
Gli3Q61602 Gm38153-201ENSMUST00000195484 472 ntBASIC14.37□□□□□ -0.11
Gli3Q61602 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC14.37□□□□□ -0.11
Gli3Q61602 Gm5684-201ENSMUST00000198419 961 ntBASIC14.37□□□□□ -0.11
Gli3Q61602 Gm43110-201ENSMUST00000198877 226 ntBASIC14.37□□□□□ -0.11
Gli3Q61602 CT030657.4-201ENSMUST00000222177 744 ntBASIC14.37□□□□□ -0.11
Gli3Q61602 AC140406.3-201ENSMUST00000227619 478 ntBASIC14.37□□□□□ -0.11
Gli3Q61602 Hesx1-201ENSMUST00000035433 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gli3Q61602 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gli3Q61602 1700049L16Rik-201ENSMUST00000049520 543 ntBASIC14.37□□□□□ -0.11
Gli3Q61602 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gli3Q61602 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.37□□□□□ -0.11
Gli3Q61602 Btn2a2-204ENSMUST00000223877 2109 ntAPPRIS ALT2 BASIC14.37□□□□□ -0.11
Gli3Q61602 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Gli3Q61602 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gli3Q61602 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gli3Q61602 Tsga10-208ENSMUST00000193669 1981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gli3Q61602 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Gli3Q61602 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC14.37□□□□□ -0.11
Gli3Q61602 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Gli3Q61602 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Gli3Q61602 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gli3Q61602 Prnd-201ENSMUST00000110169 1918 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Gli3Q61602 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Gli3Q61602 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 143.7 ms