Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rc3h1Q4VGL6 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rc3h1Q4VGL6 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Rc3h1Q4VGL6 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Rc3h1Q4VGL6 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC12.75□□□□□ -0.37
Rc3h1Q4VGL6 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rc3h1Q4VGL6 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Rc3h1Q4VGL6 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Rc3h1Q4VGL6 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Rc3h1Q4VGL6 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rc3h1Q4VGL6 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rc3h1Q4VGL6 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rc3h1Q4VGL6 AC113282.5-201ENSMUST00000224330 1679 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Rc3h1Q4VGL6 Gm31718-201ENSMUST00000212406 1646 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rc3h1Q4VGL6 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rc3h1Q4VGL6 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rc3h1Q4VGL6 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rc3h1Q4VGL6 Gm18210-201ENSMUST00000209001 1524 ntBASIC12.74□□□□□ -0.37
Rc3h1Q4VGL6 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rc3h1Q4VGL6 Gm3409-202ENSMUST00000110599 1154 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Rc3h1Q4VGL6 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC12.74□□□□□ -0.37
Rc3h1Q4VGL6 Gm15196-201ENSMUST00000121406 482 ntBASIC12.74□□□□□ -0.37
Rc3h1Q4VGL6 Gm12453-201ENSMUST00000121981 331 ntBASIC12.74□□□□□ -0.37
Rc3h1Q4VGL6 Gm15171-201ENSMUST00000122191 334 ntBASIC12.74□□□□□ -0.37
Rc3h1Q4VGL6 Gm13026-201ENSMUST00000140113 608 ntTSL 5 BASIC12.74□□□□□ -0.37
Rc3h1Q4VGL6 Gm20854-201ENSMUST00000178889 1002 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Rc3h1Q4VGL6 Gm3415-202ENSMUST00000179214 1154 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Rc3h1Q4VGL6 Mir6941-201ENSMUST00000184711 59 ntBASIC12.74□□□□□ -0.37
Rc3h1Q4VGL6 Gm43316-201ENSMUST00000197252 1295 ntBASIC12.74□□□□□ -0.37
Rc3h1Q4VGL6 Gm3409-203ENSMUST00000199142 1167 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Rc3h1Q4VGL6 Gm40332-201ENSMUST00000199847 938 ntBASIC12.74□□□□□ -0.37
Rc3h1Q4VGL6 Gm3402-203ENSMUST00000200228 1154 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Rc3h1Q4VGL6 Gm44785-201ENSMUST00000207379 620 ntTSL 5 BASIC12.74□□□□□ -0.37
Rc3h1Q4VGL6 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC12.74□□□□□ -0.37
Rc3h1Q4VGL6 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Rc3h1Q4VGL6 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rc3h1Q4VGL6 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Rc3h1Q4VGL6 Gm29151-201ENSMUST00000196669 2513 ntTSL 5 BASIC12.74□□□□□ -0.37
Rc3h1Q4VGL6 Dzip1l-202ENSMUST00000112884 3791 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Rc3h1Q4VGL6 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rc3h1Q4VGL6 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.74□□□□□ -0.37
Rc3h1Q4VGL6 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rc3h1Q4VGL6 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rc3h1Q4VGL6 Cdc37l1-201ENSMUST00000050148 5179 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rc3h1Q4VGL6 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Rc3h1Q4VGL6 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rc3h1Q4VGL6 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC12.74□□□□□ -0.37
Rc3h1Q4VGL6 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Rc3h1Q4VGL6 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC12.74□□□□□ -0.37
Rc3h1Q4VGL6 Gm13657-201ENSMUST00000135682 1939 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Rc3h1Q4VGL6 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC12.74□□□□□ -0.37
Rc3h1Q4VGL6 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Gpr143-201ENSMUST00000026383 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Gm14005-210ENSMUST00000225087 1413 ntBASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Prss57-201ENSMUST00000020573 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Gm15136-201ENSMUST00000120552 533 ntBASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Mir1893-201ENSMUST00000122565 83 ntBASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Gm17214-201ENSMUST00000164501 541 ntBASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Gm26119-201ENSMUST00000175601 104 ntBASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Gm6677-201ENSMUST00000195100 441 ntBASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Gm4924-205ENSMUST00000211099 490 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 AC134601.2-201ENSMUST00000221071 130 ntBASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 AC102847.1-202ENSMUST00000226313 1245 ntBASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 BX649293.1-201ENSMUST00000227437 631 ntBASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Cxcl1-201ENSMUST00000031327 953 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Mustn1-201ENSMUST00000040715 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Prr19-201ENSMUST00000080288 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Lin54-210ENSMUST00000154921 3734 ntTSL 5 BASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Col18a1-203ENSMUST00000105409 4791 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 AC122273.1-201ENSMUST00000213634 2327 ntBASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Rc3h1Q4VGL6 Prr16-201ENSMUST00000116639 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms