Protein–RNA interactions for Protein: Q4VBF2

R3hdm4, R3H domain-containing protein 4, mousemouse

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm4Q4VBF2 Etv3-201ENSMUST00000117293 2151 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
R3hdm4Q4VBF2 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
R3hdm4Q4VBF2 L1cam-202ENSMUST00000102871 5113 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
R3hdm4Q4VBF2 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
R3hdm4Q4VBF2 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
R3hdm4Q4VBF2 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
R3hdm4Q4VBF2 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC11.78□□□□□ -0.52
R3hdm4Q4VBF2 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
R3hdm4Q4VBF2 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
R3hdm4Q4VBF2 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
R3hdm4Q4VBF2 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
R3hdm4Q4VBF2 Gm12795-201ENSMUST00000117594 539 ntBASIC11.78□□□□□ -0.52
R3hdm4Q4VBF2 Mir1905-201ENSMUST00000122779 82 ntBASIC11.78□□□□□ -0.52
R3hdm4Q4VBF2 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC11.78□□□□□ -0.52
R3hdm4Q4VBF2 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
R3hdm4Q4VBF2 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC11.78□□□□□ -0.52
R3hdm4Q4VBF2 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC11.78□□□□□ -0.52
R3hdm4Q4VBF2 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC11.78□□□□□ -0.52
R3hdm4Q4VBF2 Gm27441-201ENSMUST00000185000 105 ntBASIC11.78□□□□□ -0.52
R3hdm4Q4VBF2 Gm44216-201ENSMUST00000203942 157 ntBASIC11.78□□□□□ -0.52
R3hdm4Q4VBF2 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC11.78□□□□□ -0.52
R3hdm4Q4VBF2 Gm2594-201ENSMUST00000214774 742 ntBASIC11.78□□□□□ -0.52
R3hdm4Q4VBF2 Stt3a-209ENSMUST00000217599 285 ntTSL 5 BASIC11.78□□□□□ -0.52
R3hdm4Q4VBF2 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC11.78□□□□□ -0.52
R3hdm4Q4VBF2 Gm32939-201ENSMUST00000222336 843 ntTSL 3 BASIC11.78□□□□□ -0.52
R3hdm4Q4VBF2 Ap3s1-202ENSMUST00000224622 978 ntBASIC11.78□□□□□ -0.52
R3hdm4Q4VBF2 Gm7589-201ENSMUST00000085631 534 ntBASIC11.78□□□□□ -0.52
R3hdm4Q4VBF2 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
R3hdm4Q4VBF2 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
R3hdm4Q4VBF2 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
R3hdm4Q4VBF2 Brcc3-203ENSMUST00000118428 2093 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
R3hdm4Q4VBF2 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
R3hdm4Q4VBF2 Fdft1-201ENSMUST00000054963 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
R3hdm4Q4VBF2 Fbln2-201ENSMUST00000041544 4786 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
R3hdm4Q4VBF2 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
R3hdm4Q4VBF2 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
R3hdm4Q4VBF2 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC11.78□□□□□ -0.52
R3hdm4Q4VBF2 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC11.78□□□□□ -0.52
R3hdm4Q4VBF2 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
R3hdm4Q4VBF2 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
R3hdm4Q4VBF2 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
R3hdm4Q4VBF2 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
R3hdm4Q4VBF2 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
R3hdm4Q4VBF2 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
R3hdm4Q4VBF2 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
R3hdm4Q4VBF2 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
R3hdm4Q4VBF2 Gm6559-201ENSMUST00000204678 1694 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
R3hdm4Q4VBF2 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
R3hdm4Q4VBF2 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
R3hdm4Q4VBF2 Gm42499-201ENSMUST00000196193 1412 ntBASIC11.77□□□□□ -0.52
R3hdm4Q4VBF2 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
R3hdm4Q4VBF2 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC11.77□□□□□ -0.52
R3hdm4Q4VBF2 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
R3hdm4Q4VBF2 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
R3hdm4Q4VBF2 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
R3hdm4Q4VBF2 Ppp2r2cos-201ENSMUST00000152862 1491 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
R3hdm4Q4VBF2 Ecsit-203ENSMUST00000179422 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
R3hdm4Q4VBF2 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
R3hdm4Q4VBF2 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.52
R3hdm4Q4VBF2 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
R3hdm4Q4VBF2 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
R3hdm4Q4VBF2 Gfm2-202ENSMUST00000042084 3074 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
R3hdm4Q4VBF2 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
R3hdm4Q4VBF2 Cpne9-201ENSMUST00000041203 2777 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
R3hdm4Q4VBF2 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC11.77□□□□□ -0.53
R3hdm4Q4VBF2 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC11.77□□□□□ -0.53
R3hdm4Q4VBF2 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
R3hdm4Q4VBF2 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC11.77□□□□□ -0.53
R3hdm4Q4VBF2 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
R3hdm4Q4VBF2 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC11.77□□□□□ -0.53
R3hdm4Q4VBF2 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC11.77□□□□□ -0.53
R3hdm4Q4VBF2 Gm13445-201ENSMUST00000121664 307 ntBASIC11.77□□□□□ -0.53
R3hdm4Q4VBF2 Gm12570-201ENSMUST00000122047 1030 ntBASIC11.77□□□□□ -0.53
R3hdm4Q4VBF2 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
R3hdm4Q4VBF2 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC11.77□□□□□ -0.53
R3hdm4Q4VBF2 Gm24248-201ENSMUST00000157321 322 ntBASIC11.77□□□□□ -0.53
R3hdm4Q4VBF2 Gm17221-201ENSMUST00000163909 481 ntBASIC11.77□□□□□ -0.53
R3hdm4Q4VBF2 Gm8723-201ENSMUST00000166076 820 ntBASIC11.77□□□□□ -0.53
R3hdm4Q4VBF2 Gm17073-201ENSMUST00000168069 556 ntBASIC11.77□□□□□ -0.53
R3hdm4Q4VBF2 Gm8701-201ENSMUST00000169259 874 ntBASIC11.77□□□□□ -0.53
R3hdm4Q4VBF2 Gm19587-201ENSMUST00000191395 545 ntBASIC11.77□□□□□ -0.53
R3hdm4Q4VBF2 Gm20781-201ENSMUST00000193154 693 ntBASIC11.77□□□□□ -0.53
R3hdm4Q4VBF2 Gm21736-201ENSMUST00000195399 693 ntBASIC11.77□□□□□ -0.53
R3hdm4Q4VBF2 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC11.77□□□□□ -0.53
R3hdm4Q4VBF2 Gm7596-202ENSMUST00000202171 737 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
R3hdm4Q4VBF2 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC11.77□□□□□ -0.53
R3hdm4Q4VBF2 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC11.77□□□□□ -0.53
R3hdm4Q4VBF2 Gm9487-201ENSMUST00000216600 472 ntBASIC11.77□□□□□ -0.53
R3hdm4Q4VBF2 Gm5178-201ENSMUST00000219380 898 ntBASIC11.77□□□□□ -0.53
R3hdm4Q4VBF2 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC11.77□□□□□ -0.53
R3hdm4Q4VBF2 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
R3hdm4Q4VBF2 Spata46-201ENSMUST00000056991 771 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
R3hdm4Q4VBF2 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
R3hdm4Q4VBF2 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC11.77□□□□□ -0.53
R3hdm4Q4VBF2 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
R3hdm4Q4VBF2 Dcc-202ENSMUST00000114943 5219 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
R3hdm4Q4VBF2 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
R3hdm4Q4VBF2 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
R3hdm4Q4VBF2 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
R3hdm4Q4VBF2 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms