Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Gm12516-201ENSMUST00000120819 385 ntBASIC9.45□□□□□ -0.9
Znf48Q3US17 Gm8199-201ENSMUST00000121323 823 ntBASIC9.45□□□□□ -0.9
Znf48Q3US17 Gm13182-201ENSMUST00000122241 312 ntBASIC9.45□□□□□ -0.9
Znf48Q3US17 Gm12885-201ENSMUST00000122246 328 ntBASIC9.45□□□□□ -0.9
Znf48Q3US17 Mir1901-201ENSMUST00000122616 78 ntBASIC9.45□□□□□ -0.9
Znf48Q3US17 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC9.45□□□□□ -0.9
Znf48Q3US17 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC9.45□□□□□ -0.9
Znf48Q3US17 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC9.45□□□□□ -0.9
Znf48Q3US17 Gm23771-201ENSMUST00000178702 110 ntBASIC9.45□□□□□ -0.9
Znf48Q3US17 Gm6771-201ENSMUST00000182716 1001 ntBASIC9.45□□□□□ -0.9
Znf48Q3US17 Gm27910-201ENSMUST00000185004 107 ntBASIC9.45□□□□□ -0.9
Znf48Q3US17 Gm37026-201ENSMUST00000191917 535 ntTSL 5 BASIC9.45□□□□□ -0.9
Znf48Q3US17 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Znf48Q3US17 Gm44837-201ENSMUST00000206863 717 ntBASIC9.45□□□□□ -0.9
Znf48Q3US17 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Znf48Q3US17 AC153954.1-201ENSMUST00000216959 255 ntBASIC9.45□□□□□ -0.9
Znf48Q3US17 1110019B22Rik-202ENSMUST00000218396 989 ntTSL 5 BASIC9.45□□□□□ -0.9
Znf48Q3US17 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC9.45□□□□□ -0.9
Znf48Q3US17 AC154290.1-201ENSMUST00000223786 1240 ntBASIC9.45□□□□□ -0.9
Znf48Q3US17 CT030652.1-201ENSMUST00000227377 1235 ntBASIC9.45□□□□□ -0.9
Znf48Q3US17 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Znf48Q3US17 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Znf48Q3US17 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Znf48Q3US17 Gm5455-201ENSMUST00000058710 715 ntBASIC9.45□□□□□ -0.9
Znf48Q3US17 Gm5879-201ENSMUST00000089501 1209 ntBASIC9.45□□□□□ -0.9
Znf48Q3US17 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Znf48Q3US17 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Znf48Q3US17 Gm45172-201ENSMUST00000206054 1301 ntBASIC9.45□□□□□ -0.9
Znf48Q3US17 Gm36635-201ENSMUST00000221152 1332 ntTSL 5 BASIC9.45□□□□□ -0.9
Znf48Q3US17 Arhgap6-202ENSMUST00000087016 1310 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Znf48Q3US17 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Znf48Q3US17 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Znf48Q3US17 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Znf48Q3US17 Hnf1b-202ENSMUST00000108113 2376 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Znf48Q3US17 Rsrc1-206ENSMUST00000162036 1406 ntAPPRIS P2 TSL 5 BASIC9.45□□□□□ -0.9
Znf48Q3US17 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Znf48Q3US17 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC9.45□□□□□ -0.9
Znf48Q3US17 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Znf48Q3US17 Cntnap2-201ENSMUST00000060839 1540 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Znf48Q3US17 Tmcc3-204ENSMUST00000121471 2614 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Znf48Q3US17 Prpf18-204ENSMUST00000152362 1579 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Znf48Q3US17 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Znf48Q3US17 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC9.45□□□□□ -0.9
Znf48Q3US17 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Znf48Q3US17 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Znf48Q3US17 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Znf48Q3US17 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Znf48Q3US17 Gm43999-201ENSMUST00000204286 2889 ntBASIC9.45□□□□□ -0.9
Znf48Q3US17 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Znf48Q3US17 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC9.45□□□□□ -0.9
Znf48Q3US17 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Znf48Q3US17 Gm38292-201ENSMUST00000192646 3045 ntBASIC9.45□□□□□ -0.9
Znf48Q3US17 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Znf48Q3US17 Lig3-202ENSMUST00000080461 3056 ntTSL 5 BASIC9.45□□□□□ -0.9
Znf48Q3US17 Gm37057-201ENSMUST00000192624 1916 ntBASIC9.44□□□□□ -0.9
Znf48Q3US17 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Znf48Q3US17 Mamld1-201ENSMUST00000082088 4796 ntAPPRIS P4 TSL 5 BASIC9.44□□□□□ -0.9
Znf48Q3US17 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Znf48Q3US17 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Znf48Q3US17 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Znf48Q3US17 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Znf48Q3US17 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Znf48Q3US17 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Znf48Q3US17 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Znf48Q3US17 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Znf48Q3US17 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Znf48Q3US17 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Znf48Q3US17 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Znf48Q3US17 Gm24934-201ENSMUST00000103764 111 ntBASIC9.44□□□□□ -0.9
Znf48Q3US17 Sh3bgrl3-202ENSMUST00000105879 518 ntTSL 3 BASIC9.44□□□□□ -0.9
Znf48Q3US17 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Znf48Q3US17 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC9.44□□□□□ -0.9
Znf48Q3US17 Snrnp27-201ENSMUST00000001186 885 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Znf48Q3US17 Gm12757-201ENSMUST00000119465 800 ntBASIC9.44□□□□□ -0.9
Znf48Q3US17 Gm11956-201ENSMUST00000119525 512 ntBASIC9.44□□□□□ -0.9
Znf48Q3US17 Gm14746-201ENSMUST00000120309 741 ntBASIC9.44□□□□□ -0.9
Znf48Q3US17 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC9.44□□□□□ -0.9
Znf48Q3US17 1810008B01Rik-201ENSMUST00000162325 829 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Znf48Q3US17 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC9.44□□□□□ -0.9
Znf48Q3US17 Gm7714-201ENSMUST00000169154 685 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Znf48Q3US17 Gm17334-201ENSMUST00000170390 907 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Znf48Q3US17 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC9.44□□□□□ -0.9
Znf48Q3US17 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Znf48Q3US17 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Znf48Q3US17 Gm26595-201ENSMUST00000181585 484 ntBASIC9.44□□□□□ -0.9
Znf48Q3US17 Pou1f1-205ENSMUST00000184525 1020 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Znf48Q3US17 Gm29617-203ENSMUST00000186558 1033 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Znf48Q3US17 Gm28199-201ENSMUST00000187127 619 ntTSL 3 BASIC9.44□□□□□ -0.9
Znf48Q3US17 Gm37560-201ENSMUST00000194289 1000 ntBASIC9.44□□□□□ -0.9
Znf48Q3US17 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC9.44□□□□□ -0.9
Znf48Q3US17 Gtf3c6-201ENSMUST00000019982 887 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Znf48Q3US17 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC9.44□□□□□ -0.9
Znf48Q3US17 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Znf48Q3US17 Gm20136-201ENSMUST00000207501 891 ntBASIC9.44□□□□□ -0.9
Znf48Q3US17 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC9.44□□□□□ -0.9
Znf48Q3US17 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC9.44□□□□□ -0.9
Znf48Q3US17 Gm29794-201ENSMUST00000218919 1247 ntBASIC9.44□□□□□ -0.9
Znf48Q3US17 Gm6867-201ENSMUST00000219165 425 ntBASIC9.44□□□□□ -0.9
Znf48Q3US17 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC9.44□□□□□ -0.9
Znf48Q3US17 5830428M24Rik-204ENSMUST00000223143 1034 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms