Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3b2Q3UJB0 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3b2Q3UJB0 Gm37058-201ENSMUST00000193393 1644 ntBASIC14.19□□□□□ -0.14
Sf3b2Q3UJB0 1700022A22Rik-202ENSMUST00000187130 1458 ntTSL 5 BASIC14.19□□□□□ -0.14
Sf3b2Q3UJB0 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3b2Q3UJB0 A230077H06Rik-202ENSMUST00000189574 2477 ntTSL 2 BASIC14.19□□□□□ -0.14
Sf3b2Q3UJB0 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3b2Q3UJB0 Gm37422-201ENSMUST00000193794 4718 ntBASIC14.19□□□□□ -0.14
Sf3b2Q3UJB0 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Sf3b2Q3UJB0 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3b2Q3UJB0 Snora68-201ENSMUST00000104375 131 ntBASIC14.19□□□□□ -0.14
Sf3b2Q3UJB0 Fgf1-203ENSMUST00000117566 418 ntTSL 5 BASIC14.19□□□□□ -0.14
Sf3b2Q3UJB0 Epp13-201ENSMUST00000121024 957 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Sf3b2Q3UJB0 Gm45716-201ENSMUST00000124877 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3b2Q3UJB0 1810058I24Rik-201ENSMUST00000130875 690 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3b2Q3UJB0 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC14.19□□□□□ -0.14
Sf3b2Q3UJB0 Gm2663-201ENSMUST00000166306 862 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3b2Q3UJB0 Gm18443-201ENSMUST00000185358 556 ntBASIC14.19□□□□□ -0.14
Sf3b2Q3UJB0 Platr10-202ENSMUST00000191479 818 ntBASIC14.19□□□□□ -0.14
Sf3b2Q3UJB0 Ift22-204ENSMUST00000200153 670 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3b2Q3UJB0 AC130217.1-201ENSMUST00000224146 909 ntBASIC14.19□□□□□ -0.14
Sf3b2Q3UJB0 3830406C13Rik-213ENSMUST00000225294 1191 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Sf3b2Q3UJB0 Ifne-201ENSMUST00000056014 664 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Sf3b2Q3UJB0 Olfr456-201ENSMUST00000057251 1052 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Sf3b2Q3UJB0 Zfp868-201ENSMUST00000074982 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3b2Q3UJB0 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3b2Q3UJB0 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3b2Q3UJB0 Slc25a14-208ENSMUST00000177710 1516 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3b2Q3UJB0 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Sf3b2Q3UJB0 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3b2Q3UJB0 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Sf3b2Q3UJB0 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3b2Q3UJB0 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC14.19□□□□□ -0.14
Sf3b2Q3UJB0 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3b2Q3UJB0 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Sf3b2Q3UJB0 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3b2Q3UJB0 Rab11fip1-203ENSMUST00000209377 3769 ntTSL 5 BASIC14.19□□□□□ -0.14
Sf3b2Q3UJB0 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3b2Q3UJB0 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Sf3b2Q3UJB0 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 Limch1-201ENSMUST00000038188 5903 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 AC160060.1-201ENSMUST00000217840 1813 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 Gm12774-201ENSMUST00000117881 416 ntBASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 Gm15472-201ENSMUST00000141652 847 ntTSL 5 BASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 Sectm1b-206ENSMUST00000168459 1075 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 Rps18-206ENSMUST00000174609 527 ntTSL 2 BASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 Mir3100-201ENSMUST00000174918 65 ntBASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 Tspy-ps-203ENSMUST00000186546 989 ntBASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 Gm38301-201ENSMUST00000195573 543 ntBASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 Gm43097-201ENSMUST00000196867 151 ntBASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 Gm6008-201ENSMUST00000206542 874 ntBASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 Gm18621-201ENSMUST00000222677 679 ntBASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 Lect2-202ENSMUST00000225183 823 ntBASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 Olfr761-201ENSMUST00000049620 1029 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 Olfr127-201ENSMUST00000076331 1095 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 Nhlrc3-201ENSMUST00000056749 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 Gm12716-201ENSMUST00000120606 1354 ntBASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Sf3b2Q3UJB0 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3b2Q3UJB0 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3b2Q3UJB0 Onecut1-201ENSMUST00000056006 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3b2Q3UJB0 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3b2Q3UJB0 Rftn1-202ENSMUST00000113195 2385 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3b2Q3UJB0 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC14.17□□□□□ -0.14
Sf3b2Q3UJB0 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3b2Q3UJB0 Sp7-201ENSMUST00000078508 2906 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3b2Q3UJB0 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Sf3b2Q3UJB0 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Sf3b2Q3UJB0 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms