Protein–RNA interactions for Protein: Q2MKA5

Chrna5, Neuronal acetylcholine receptor subunit alpha-5, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna5Q2MKA5 Ccl25-201ENSMUST00000024004 1058 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Chrna5Q2MKA5 AC122811.1-201ENSMUST00000222257 2921 ntBASIC13□□□□□ -0.33
Chrna5Q2MKA5 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Chrna5Q2MKA5 Il33-201ENSMUST00000025724 2544 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chrna5Q2MKA5 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Chrna5Q2MKA5 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC13□□□□□ -0.33
Chrna5Q2MKA5 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chrna5Q2MKA5 Eloc-208ENSMUST00000188641 2014 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Chrna5Q2MKA5 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chrna5Q2MKA5 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chrna5Q2MKA5 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chrna5Q2MKA5 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Chrna5Q2MKA5 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chrna5Q2MKA5 Fam78b-202ENSMUST00000126198 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chrna5Q2MKA5 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Chrna5Q2MKA5 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chrna5Q2MKA5 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chrna5Q2MKA5 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chrna5Q2MKA5 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Chrna5Q2MKA5 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chrna5Q2MKA5 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chrna5Q2MKA5 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC12.99□□□□□ -0.33
Chrna5Q2MKA5 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chrna5Q2MKA5 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chrna5Q2MKA5 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Chrna5Q2MKA5 Gm12397-201ENSMUST00000117674 615 ntBASIC12.99□□□□□ -0.33
Chrna5Q2MKA5 Rpl10a-ps1-201ENSMUST00000120360 654 ntBASIC12.99□□□□□ -0.33
Chrna5Q2MKA5 Gm8876-201ENSMUST00000120768 1122 ntBASIC12.99□□□□□ -0.33
Chrna5Q2MKA5 Gm14699-201ENSMUST00000122340 228 ntBASIC12.99□□□□□ -0.33
Chrna5Q2MKA5 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC12.99□□□□□ -0.33
Chrna5Q2MKA5 Gm42687-201ENSMUST00000199075 164 ntBASIC12.99□□□□□ -0.33
Chrna5Q2MKA5 Gm3289-201ENSMUST00000200819 756 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Chrna5Q2MKA5 Gm44908-201ENSMUST00000208610 266 ntBASIC12.99□□□□□ -0.33
Chrna5Q2MKA5 AC102569.1-201ENSMUST00000221563 685 ntBASIC12.99□□□□□ -0.33
Chrna5Q2MKA5 Tmsb15b2-201ENSMUST00000069803 450 ntTSL 2 BASIC12.99□□□□□ -0.33
Chrna5Q2MKA5 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chrna5Q2MKA5 Jak3-202ENSMUST00000110012 3774 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Chrna5Q2MKA5 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chrna5Q2MKA5 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chrna5Q2MKA5 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
Chrna5Q2MKA5 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chrna5Q2MKA5 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chrna5Q2MKA5 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chrna5Q2MKA5 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Chrna5Q2MKA5 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Chrna5Q2MKA5 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna5Q2MKA5 Susd5-201ENSMUST00000135338 4083 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna5Q2MKA5 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna5Q2MKA5 Rab11fip5-201ENSMUST00000060837 4035 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna5Q2MKA5 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna5Q2MKA5 Dntt-201ENSMUST00000051806 2128 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna5Q2MKA5 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna5Q2MKA5 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna5Q2MKA5 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna5Q2MKA5 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna5Q2MKA5 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna5Q2MKA5 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna5Q2MKA5 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna5Q2MKA5 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna5Q2MKA5 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna5Q2MKA5 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna5Q2MKA5 Gm7642-201ENSMUST00000216345 1809 ntBASIC12.98□□□□□ -0.33
Chrna5Q2MKA5 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna5Q2MKA5 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna5Q2MKA5 Trav13-2-201ENSMUST00000103658 390 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Chrna5Q2MKA5 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna5Q2MKA5 4930412O13Rik-202ENSMUST00000114919 558 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Chrna5Q2MKA5 Gm12435-201ENSMUST00000118949 1016 ntBASIC12.98□□□□□ -0.33
Chrna5Q2MKA5 Rpl17-ps1-201ENSMUST00000119156 552 ntBASIC12.98□□□□□ -0.33
Chrna5Q2MKA5 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC12.98□□□□□ -0.33
Chrna5Q2MKA5 Gm20694-201ENSMUST00000176943 404 ntBASIC12.98□□□□□ -0.33
Chrna5Q2MKA5 Gm5873-201ENSMUST00000177157 1066 ntBASIC12.98□□□□□ -0.33
Chrna5Q2MKA5 Mok-204ENSMUST00000177224 551 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna5Q2MKA5 Gm37597-201ENSMUST00000191853 382 ntBASIC12.98□□□□□ -0.33
Chrna5Q2MKA5 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC12.98□□□□□ -0.33
Chrna5Q2MKA5 Gm38038-201ENSMUST00000193803 259 ntBASIC12.98□□□□□ -0.33
Chrna5Q2MKA5 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna5Q2MKA5 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC12.98□□□□□ -0.33
Chrna5Q2MKA5 AC154433.1-201ENSMUST00000224401 1183 ntBASIC12.98□□□□□ -0.33
Chrna5Q2MKA5 CT009713.2-201ENSMUST00000225532 1149 ntBASIC12.98□□□□□ -0.33
Chrna5Q2MKA5 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna5Q2MKA5 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Chrna5Q2MKA5 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna5Q2MKA5 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna5Q2MKA5 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Chrna5Q2MKA5 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.98□□□□□ -0.33
Chrna5Q2MKA5 Rubie-203ENSMUST00000227803 2430 ntBASIC12.98□□□□□ -0.33
Chrna5Q2MKA5 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Chrna5Q2MKA5 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chrna5Q2MKA5 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chrna5Q2MKA5 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chrna5Q2MKA5 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Chrna5Q2MKA5 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chrna5Q2MKA5 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC12.97□□□□□ -0.33
Chrna5Q2MKA5 Klk1b26-201ENSMUST00000048945 1386 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chrna5Q2MKA5 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chrna5Q2MKA5 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chrna5Q2MKA5 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Chrna5Q2MKA5 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Chrna5Q2MKA5 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms