Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Dmtn-203ENSMUST00000110984 4176 ntAPPRIS P2 TSL 5 BASIC9.17□□□□□ -0.94
SgcaP82350 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SgcaP82350 Fam83c-201ENSMUST00000029143 3972 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SgcaP82350 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SgcaP82350 Spats2l-206ENSMUST00000167085 3929 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SgcaP82350 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SgcaP82350 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC9.17□□□□□ -0.94
SgcaP82350 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC9.17□□□□□ -0.94
SgcaP82350 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SgcaP82350 Tsix-202ENSMUST00000211291 3263 ntTSL 5 BASIC9.17□□□□□ -0.94
SgcaP82350 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC9.17□□□□□ -0.94
SgcaP82350 AC108416.1-201ENSMUST00000228755 1558 ntBASIC9.17□□□□□ -0.94
SgcaP82350 Pcdhb9-201ENSMUST00000057228 3055 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
SgcaP82350 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
SgcaP82350 Vps33a-201ENSMUST00000031388 4235 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SgcaP82350 Pogk-206ENSMUST00000169324 7034 ntAPPRIS ALT2 TSL 3 BASIC9.17□□□□□ -0.94
SgcaP82350 Taf8-201ENSMUST00000067103 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SgcaP82350 Gm9200-201ENSMUST00000118513 1354 ntBASIC9.17□□□□□ -0.94
SgcaP82350 Arhgap45-202ENSMUST00000099501 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC9.17□□□□□ -0.94
SgcaP82350 Gm22133-201ENSMUST00000102082 109 ntBASIC9.17□□□□□ -0.94
SgcaP82350 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC9.17□□□□□ -0.94
SgcaP82350 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC9.17□□□□□ -0.94
SgcaP82350 Gm17420-201ENSMUST00000164753 153 ntBASIC9.17□□□□□ -0.94
SgcaP82350 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SgcaP82350 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
SgcaP82350 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SgcaP82350 Gm13381-202ENSMUST00000177012 640 ntTSL 5 BASIC9.17□□□□□ -0.94
SgcaP82350 Gm27572-201ENSMUST00000183702 255 ntBASIC9.17□□□□□ -0.94
SgcaP82350 Gm29396-201ENSMUST00000185659 716 ntBASIC9.17□□□□□ -0.94
SgcaP82350 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SgcaP82350 Gm32999-201ENSMUST00000192693 562 ntBASIC9.17□□□□□ -0.94
SgcaP82350 Gm42588-201ENSMUST00000200538 1297 ntBASIC9.17□□□□□ -0.94
SgcaP82350 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC9.17□□□□□ -0.94
SgcaP82350 Gm32111-201ENSMUST00000207689 846 ntBASIC9.17□□□□□ -0.94
SgcaP82350 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC9.17□□□□□ -0.94
SgcaP82350 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SgcaP82350 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SgcaP82350 Gm4978-201ENSMUST00000071565 801 ntBASIC9.17□□□□□ -0.94
SgcaP82350 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
SgcaP82350 Ctsa-201ENSMUST00000017904 3674 ntAPPRIS P4 TSL 5 BASIC9.17□□□□□ -0.94
SgcaP82350 Gys1-201ENSMUST00000003964 3678 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SgcaP82350 Nfkbiz-204ENSMUST00000114458 3627 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
SgcaP82350 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SgcaP82350 Sptbn1-202ENSMUST00000011877 8238 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SgcaP82350 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC9.17□□□□□ -0.94
SgcaP82350 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
SgcaP82350 Celf5-202ENSMUST00000119060 4166 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SgcaP82350 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SgcaP82350 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SgcaP82350 Hcar2-201ENSMUST00000057145 1930 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
SgcaP82350 CT025645.2-201ENSMUST00000223278 3827 ntBASIC9.17□□□□□ -0.94
SgcaP82350 Stat1-205ENSMUST00000186574 2834 ntAPPRIS ALT1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SgcaP82350 Mc4r-201ENSMUST00000057942 2758 ntAPPRIS P1 BASIC9.17□□□□□ -0.94
SgcaP82350 Adam22-202ENSMUST00000050166 8969 ntAPPRIS ALT2 TSL 5 BASIC9.17□□□□□ -0.94
SgcaP82350 Cd163-201ENSMUST00000032234 4404 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
SgcaP82350 Cbfa2t2-201ENSMUST00000045270 6069 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
SgcaP82350 Igf2bp3-201ENSMUST00000031838 4345 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
SgcaP82350 Dclk1-203ENSMUST00000167204 6025 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
SgcaP82350 Vmn1r213-204ENSMUST00000228758 5975 ntAPPRIS P2 BASIC9.17□□□□□ -0.94
SgcaP82350 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC9.16□□□□□ -0.94
SgcaP82350 Eif2s2-201ENSMUST00000099173 2542 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SgcaP82350 Cyp4x1-202ENSMUST00000106545 4187 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
SgcaP82350 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
SgcaP82350 Sipa1l1-210ENSMUST00000222714 6002 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
SgcaP82350 Rcbtb2-219ENSMUST00000169513 3622 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
SgcaP82350 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SgcaP82350 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SgcaP82350 Havcr1-202ENSMUST00000081819 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
SgcaP82350 Gm28424-201ENSMUST00000187393 1319 ntBASIC9.16□□□□□ -0.94
SgcaP82350 Ptprm-201ENSMUST00000037974 5186 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
SgcaP82350 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC9.16□□□□□ -0.94
SgcaP82350 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC9.16□□□□□ -0.94
SgcaP82350 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC9.16□□□□□ -0.94
SgcaP82350 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC9.16□□□□□ -0.94
SgcaP82350 Gm13786-201ENSMUST00000122371 333 ntBASIC9.16□□□□□ -0.94
SgcaP82350 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SgcaP82350 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
SgcaP82350 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC9.16□□□□□ -0.94
SgcaP82350 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
SgcaP82350 Gm28686-201ENSMUST00000187404 609 ntBASIC9.16□□□□□ -0.94
SgcaP82350 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC9.16□□□□□ -0.94
SgcaP82350 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC9.16□□□□□ -0.94
SgcaP82350 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SgcaP82350 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
SgcaP82350 Gm44888-201ENSMUST00000209119 2541 ntBASIC9.16□□□□□ -0.94
SgcaP82350 Eif4e1b-206ENSMUST00000132728 1897 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
SgcaP82350 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC9.16□□□□□ -0.94
SgcaP82350 Cacna1c-208ENSMUST00000187317 6663 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
SgcaP82350 Slc7a3-202ENSMUST00000101362 2371 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SgcaP82350 Plekhg5-201ENSMUST00000084115 4113 ntAPPRIS ALT2 TSL 2 BASIC9.16□□□□□ -0.94
SgcaP82350 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC9.16□□□□□ -0.94
SgcaP82350 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC9.16□□□□□ -0.94
SgcaP82350 9130019O22Rik-201ENSMUST00000049052 3878 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SgcaP82350 Man2c1-211ENSMUST00000160147 3820 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
SgcaP82350 Gm33914-201ENSMUST00000214108 2150 ntTSL 5 BASIC9.16□□□□□ -0.94
SgcaP82350 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SgcaP82350 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SgcaP82350 Pif1-201ENSMUST00000047099 3685 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
SgcaP82350 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
SgcaP82350 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms