Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.37□□□□□ -0.75
Nup43P59235 Gm9139-201ENSMUST00000218817 700 ntBASIC10.37□□□□□ -0.75
Nup43P59235 Gm18042-201ENSMUST00000219887 790 ntBASIC10.37□□□□□ -0.75
Nup43P59235 1700011B04Rik-204ENSMUST00000220859 422 ntTSL 5 BASIC10.37□□□□□ -0.75
Nup43P59235 AC099645.1-201ENSMUST00000226476 1105 ntBASIC10.37□□□□□ -0.75
Nup43P59235 Prrxl1-205ENSMUST00000228878 723 ntBASIC10.37□□□□□ -0.75
Nup43P59235 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nup43P59235 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nup43P59235 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nup43P59235 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nup43P59235 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nup43P59235 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nup43P59235 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nup43P59235 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Nup43P59235 Zfp366-201ENSMUST00000056558 6382 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nup43P59235 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC10.37□□□□□ -0.75
Nup43P59235 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nup43P59235 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nup43P59235 Gm36987-201ENSMUST00000194704 2979 ntBASIC10.37□□□□□ -0.75
Nup43P59235 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC10.37□□□□□ -0.75
Nup43P59235 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nup43P59235 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nup43P59235 Polq-202ENSMUST00000071452 7290 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nup43P59235 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nup43P59235 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nup43P59235 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Nup43P59235 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nup43P59235 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nup43P59235 Cacna1c-219ENSMUST00000189389 6603 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Nup43P59235 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nup43P59235 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC10.36□□□□□ -0.75
Nup43P59235 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Nup43P59235 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nup43P59235 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC10.36□□□□□ -0.75
Nup43P59235 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nup43P59235 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Nup43P59235 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Nup43P59235 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Nup43P59235 Gm44106-201ENSMUST00000203153 1599 ntBASIC10.36□□□□□ -0.75
Nup43P59235 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nup43P59235 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nup43P59235 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nup43P59235 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nup43P59235 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nup43P59235 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nup43P59235 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nup43P59235 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nup43P59235 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Nup43P59235 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nup43P59235 Defa-ps4-201ENSMUST00000118021 183 ntBASIC10.36□□□□□ -0.75
Nup43P59235 Gm11573-201ENSMUST00000119956 394 ntBASIC10.36□□□□□ -0.75
Nup43P59235 Mir1901-201ENSMUST00000122616 78 ntBASIC10.36□□□□□ -0.75
Nup43P59235 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC10.36□□□□□ -0.75
Nup43P59235 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC10.36□□□□□ -0.75
Nup43P59235 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC10.36□□□□□ -0.75
Nup43P59235 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nup43P59235 Gm5778-201ENSMUST00000171003 1072 ntBASIC10.36□□□□□ -0.75
Nup43P59235 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
Nup43P59235 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC10.36□□□□□ -0.75
Nup43P59235 Gm37638-201ENSMUST00000194337 1123 ntBASIC10.36□□□□□ -0.75
Nup43P59235 Gm9884-201ENSMUST00000194343 1222 ntBASIC10.36□□□□□ -0.75
Nup43P59235 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC10.36□□□□□ -0.75
Nup43P59235 Gm3726-201ENSMUST00000203110 785 ntBASIC10.36□□□□□ -0.75
Nup43P59235 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC10.36□□□□□ -0.75
Nup43P59235 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Nup43P59235 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC10.36□□□□□ -0.75
Nup43P59235 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC10.36□□□□□ -0.75
Nup43P59235 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC10.36□□□□□ -0.75
Nup43P59235 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nup43P59235 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nup43P59235 Mgp-201ENSMUST00000032342 617 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nup43P59235 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nup43P59235 Tmem220-202ENSMUST00000079077 1147 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nup43P59235 Mybphl-201ENSMUST00000090563 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nup43P59235 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Nup43P59235 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nup43P59235 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC10.36□□□□□ -0.75
Nup43P59235 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nup43P59235 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Nup43P59235 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nup43P59235 Sptan1-204ENSMUST00000113717 7958 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nup43P59235 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nup43P59235 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nup43P59235 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nup43P59235 Nmt2-201ENSMUST00000081932 4461 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nup43P59235 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nup43P59235 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nup43P59235 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nup43P59235 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nup43P59235 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nup43P59235 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nup43P59235 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nup43P59235 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nup43P59235 Gm6641-201ENSMUST00000196100 1315 ntBASIC10.35□□□□□ -0.75
Nup43P59235 Clec4a3-201ENSMUST00000088468 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nup43P59235 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nup43P59235 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nup43P59235 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nup43P59235 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Nup43P59235 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms