Protein–RNA interactions for Protein: P56183

Rrp1, Ribosomal RNA processing protein 1 homolog A, mousemouse

Known RBP Predictions only

Length 494 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp1P56183 Gm5468-202ENSMUST00000227851 682 ntBASIC12.33□□□□□ -0.44
Rrp1P56183 Klhl7-201ENSMUST00000030841 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rrp1P56183 Lcn8-201ENSMUST00000038482 651 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rrp1P56183 Gm23105-201ENSMUST00000083719 134 ntBASIC12.33□□□□□ -0.44
Rrp1P56183 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Rrp1P56183 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Rrp1P56183 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rrp1P56183 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rrp1P56183 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rrp1P56183 9530026P05Rik-204ENSMUST00000204449 1740 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rrp1P56183 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rrp1P56183 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rrp1P56183 Spert-204ENSMUST00000169658 1474 ntAPPRIS ALT2 TSL 3 BASIC12.33□□□□□ -0.44
Rrp1P56183 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Rrp1P56183 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rrp1P56183 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Rrp1P56183 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rrp1P56183 Gm15651-201ENSMUST00000159953 2507 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rrp1P56183 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Rrp1P56183 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Rrp1P56183 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp1P56183 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Rrp1P56183 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Rrp1P56183 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp1P56183 Zer1-201ENSMUST00000044751 4100 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp1P56183 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp1P56183 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp1P56183 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp1P56183 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp1P56183 Arhgap33-204ENSMUST00000207860 4396 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp1P56183 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp1P56183 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp1P56183 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC12.32□□□□□ -0.44
Rrp1P56183 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp1P56183 Gm11331-201ENSMUST00000119764 288 ntBASIC12.32□□□□□ -0.44
Rrp1P56183 Gm12136-201ENSMUST00000120460 1209 ntBASIC12.32□□□□□ -0.44
Rrp1P56183 Gm11836-201ENSMUST00000121022 441 ntBASIC12.32□□□□□ -0.44
Rrp1P56183 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC12.32□□□□□ -0.44
Rrp1P56183 Gm7666-201ENSMUST00000146631 819 ntBASIC12.32□□□□□ -0.44
Rrp1P56183 Gm37246-201ENSMUST00000192665 835 ntBASIC12.32□□□□□ -0.44
Rrp1P56183 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC12.32□□□□□ -0.44
Rrp1P56183 Gm35549-202ENSMUST00000203656 1009 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rrp1P56183 Gm7848-201ENSMUST00000210739 718 ntBASIC12.32□□□□□ -0.44
Rrp1P56183 Ccdc28b-201ENSMUST00000030586 879 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp1P56183 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp1P56183 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp1P56183 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Rrp1P56183 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp1P56183 Hspa14-201ENSMUST00000027961 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp1P56183 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp1P56183 Mdm1-203ENSMUST00000164077 2922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp1P56183 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp1P56183 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Rrp1P56183 Dhx34-202ENSMUST00000118795 4076 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Rrp1P56183 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC12.32□□□□□ -0.44
Rrp1P56183 Gm9415-201ENSMUST00000200462 1321 ntBASIC12.32□□□□□ -0.44
Rrp1P56183 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rrp1P56183 Gm37697-201ENSMUST00000195680 1844 ntBASIC12.32□□□□□ -0.44
Rrp1P56183 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
Rrp1P56183 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Rrp1P56183 4933425M03Rik-201ENSMUST00000195991 1544 ntBASIC12.32□□□□□ -0.44
Rrp1P56183 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rrp1P56183 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Rrp1P56183 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rrp1P56183 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC12.31□□□□□ -0.44
Rrp1P56183 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rrp1P56183 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.31□□□□□ -0.44
Rrp1P56183 Tyro3-202ENSMUST00000110783 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rrp1P56183 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rrp1P56183 Ppp6r2-201ENSMUST00000088788 2887 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Rrp1P56183 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rrp1P56183 Ptcd1-201ENSMUST00000031628 3087 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rrp1P56183 Gpr68-201ENSMUST00000053668 3099 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Rrp1P56183 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rrp1P56183 Smpd4-218ENSMUST00000170273 2166 ntTSL 5 BASIC12.31□□□□□ -0.44
Rrp1P56183 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rrp1P56183 Gm15352-201ENSMUST00000118696 270 ntBASIC12.31□□□□□ -0.44
Rrp1P56183 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC12.31□□□□□ -0.44
Rrp1P56183 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC12.31□□□□□ -0.44
Rrp1P56183 Gm37852-201ENSMUST00000193027 350 ntBASIC12.31□□□□□ -0.44
Rrp1P56183 Gm30946-201ENSMUST00000198288 724 ntBASIC12.31□□□□□ -0.44
Rrp1P56183 Gm35060-201ENSMUST00000207669 825 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Rrp1P56183 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rrp1P56183 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rrp1P56183 Spcs1-203ENSMUST00000226374 592 ntBASIC12.31□□□□□ -0.44
Rrp1P56183 Gm1821-202ENSMUST00000227415 750 ntBASIC12.31□□□□□ -0.44
Rrp1P56183 Gm32200-201ENSMUST00000192778 2385 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rrp1P56183 Slc18a1-201ENSMUST00000037478 3115 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rrp1P56183 Fnbp1l-201ENSMUST00000162409 5198 ntTSL 5 BASIC12.31□□□□□ -0.44
Rrp1P56183 Pitpnc1-202ENSMUST00000103064 6329 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rrp1P56183 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rrp1P56183 Vwa7-202ENSMUST00000172499 3970 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rrp1P56183 Lig3-212ENSMUST00000173727 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rrp1P56183 Pou2f1-204ENSMUST00000111426 2671 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Rrp1P56183 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rrp1P56183 Morf4l2-213ENSMUST00000166478 1720 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Rrp1P56183 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rrp1P56183 6430548M08Rik-203ENSMUST00000108950 3125 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rrp1P56183 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Rrp1P56183 Prss47-202ENSMUST00000203968 1353 ntAPPRIS P5 TSL 5 BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms