Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm13183-201ENSMUST00000118615 789 ntBASIC11.26□□□□□ -0.61
Sox1P53783 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sox1P53783 4930529I22Rik-201ENSMUST00000131509 589 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sox1P53783 Gm15839-201ENSMUST00000138684 612 ntTSL 3 BASIC11.26□□□□□ -0.61
Sox1P53783 Stk33-205ENSMUST00000141210 949 ntTSL 3 BASIC11.26□□□□□ -0.61
Sox1P53783 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Sox1P53783 Rpl17-ps11-201ENSMUST00000161946 729 ntBASIC11.26□□□□□ -0.61
Sox1P53783 Gm6970-201ENSMUST00000169692 666 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Sox1P53783 Gm9630-201ENSMUST00000178304 885 ntBASIC11.26□□□□□ -0.61
Sox1P53783 Rbp2-204ENSMUST00000189446 803 ntAPPRIS P1 TSL 3 BASIC11.26□□□□□ -0.61
Sox1P53783 Gm37819-201ENSMUST00000194626 1065 ntBASIC11.26□□□□□ -0.61
Sox1P53783 Adh6-ps1-202ENSMUST00000196293 754 ntBASIC11.26□□□□□ -0.61
Sox1P53783 Gm42859-201ENSMUST00000199572 193 ntBASIC11.26□□□□□ -0.61
Sox1P53783 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sox1P53783 Gm18862-201ENSMUST00000204643 933 ntBASIC11.26□□□□□ -0.61
Sox1P53783 AC140381.2-201ENSMUST00000217935 1260 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sox1P53783 Gm3791-201ENSMUST00000220790 768 ntBASIC11.26□□□□□ -0.61
Sox1P53783 Gm18030-201ENSMUST00000222163 731 ntBASIC11.26□□□□□ -0.61
Sox1P53783 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.26□□□□□ -0.61
Sox1P53783 CT025538.1-201ENSMUST00000223638 369 ntBASIC11.26□□□□□ -0.61
Sox1P53783 AL844586.1-201ENSMUST00000224297 1042 ntBASIC11.26□□□□□ -0.61
Sox1P53783 AC114585.2-201ENSMUST00000227693 486 ntBASIC11.26□□□□□ -0.61
Sox1P53783 Clpsl2-201ENSMUST00000025061 442 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox1P53783 Gm5148-202ENSMUST00000099128 1098 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox1P53783 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox1P53783 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox1P53783 Trim61-201ENSMUST00000078409 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox1P53783 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
Sox1P53783 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sox1P53783 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox1P53783 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox1P53783 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Sox1P53783 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox1P53783 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sox1P53783 Gm44758-201ENSMUST00000206096 2068 ntBASIC11.26□□□□□ -0.61
Sox1P53783 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.26□□□□□ -0.61
Sox1P53783 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sox1P53783 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sox1P53783 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox1P53783 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox1P53783 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Sox1P53783 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox1P53783 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox1P53783 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox1P53783 Mtmr4-201ENSMUST00000092802 5525 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sox1P53783 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.25□□□□□ -0.61
Sox1P53783 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox1P53783 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox1P53783 2610037D02Rik-201ENSMUST00000180852 2449 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sox1P53783 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox1P53783 Nrg1-211ENSMUST00000208497 2096 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sox1P53783 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox1P53783 Gm5472-201ENSMUST00000178604 1678 ntBASIC11.25□□□□□ -0.61
Sox1P53783 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Sox1P53783 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC11.25□□□□□ -0.61
Sox1P53783 Ifna6-201ENSMUST00000105146 570 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Sox1P53783 Gm14676-201ENSMUST00000117722 858 ntBASIC11.25□□□□□ -0.61
Sox1P53783 Gm14231-201ENSMUST00000120090 592 ntBASIC11.25□□□□□ -0.61
Sox1P53783 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox1P53783 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC11.25□□□□□ -0.61
Sox1P53783 Gm12679-201ENSMUST00000123899 636 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sox1P53783 Zfp738-202ENSMUST00000125495 712 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sox1P53783 6330418K02Rik-202ENSMUST00000125662 1267 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sox1P53783 4933403O08Rik-201ENSMUST00000132037 999 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox1P53783 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sox1P53783 Gm11789-205ENSMUST00000148579 649 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sox1P53783 Gm23916-201ENSMUST00000158484 399 ntBASIC11.25□□□□□ -0.61
Sox1P53783 Slirp-202ENSMUST00000160488 802 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox1P53783 Gm7138-201ENSMUST00000167669 693 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Sox1P53783 Ifna11-201ENSMUST00000170428 573 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Sox1P53783 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Sox1P53783 Gm6686-201ENSMUST00000178455 258 ntBASIC11.25□□□□□ -0.61
Sox1P53783 Gm26750-201ENSMUST00000181718 711 ntTSL 5 BASIC11.25□□□□□ -0.61
Sox1P53783 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Sox1P53783 Gm9723-201ENSMUST00000192100 457 ntBASIC11.25□□□□□ -0.61
Sox1P53783 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sox1P53783 Gm43037-201ENSMUST00000196808 250 ntBASIC11.25□□□□□ -0.61
Sox1P53783 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC11.25□□□□□ -0.61
Sox1P53783 Gm44716-201ENSMUST00000209007 710 ntBASIC11.25□□□□□ -0.61
Sox1P53783 Gm45308-201ENSMUST00000210610 415 ntBASIC11.25□□□□□ -0.61
Sox1P53783 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC11.25□□□□□ -0.61
Sox1P53783 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.25□□□□□ -0.61
Sox1P53783 Gm46376-201ENSMUST00000222653 654 ntTSL 3 BASIC11.25□□□□□ -0.61
Sox1P53783 AC125539.1-201ENSMUST00000227423 622 ntBASIC11.25□□□□□ -0.61
Sox1P53783 AC123061.1-201ENSMUST00000228021 999 ntBASIC11.25□□□□□ -0.61
Sox1P53783 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox1P53783 Ifna1-201ENSMUST00000094972 570 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Sox1P53783 Gm10617-201ENSMUST00000098368 1172 ntBASIC11.25□□□□□ -0.61
Sox1P53783 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox1P53783 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox1P53783 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC11.25□□□□□ -0.61
Sox1P53783 Mrpl24-202ENSMUST00000119968 1339 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox1P53783 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox1P53783 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox1P53783 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox1P53783 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sox1P53783 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Sox1P53783 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sox1P53783 C230034O21Rik-201ENSMUST00000153659 2836 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sox1P53783 Trip13-201ENSMUST00000022053 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms