Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Tnnt3-224ENSMUST00000169299 1013 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Sox2P48432 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC10.21□□□□□ -0.77
Sox2P48432 Gm21778-201ENSMUST00000178779 471 ntBASIC10.21□□□□□ -0.77
Sox2P48432 Tnnt3-226ENSMUST00000180152 1067 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Sox2P48432 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Sox2P48432 Gm28032-201ENSMUST00000184104 96 ntBASIC10.21□□□□□ -0.77
Sox2P48432 Ighv1-48-201ENSMUST00000191795 294 ntBASIC10.21□□□□□ -0.77
Sox2P48432 Gm42682-201ENSMUST00000198349 1265 ntBASIC10.21□□□□□ -0.77
Sox2P48432 Gm7783-201ENSMUST00000204795 781 ntBASIC10.21□□□□□ -0.77
Sox2P48432 AC159890.1-201ENSMUST00000215382 684 ntTSL 5 BASIC10.21□□□□□ -0.77
Sox2P48432 Gm18730-201ENSMUST00000218038 343 ntBASIC10.21□□□□□ -0.77
Sox2P48432 Gm9111-201ENSMUST00000219394 709 ntBASIC10.21□□□□□ -0.77
Sox2P48432 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC10.21□□□□□ -0.77
Sox2P48432 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sox2P48432 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Sox2P48432 Gm8385-201ENSMUST00000058999 643 ntBASIC10.21□□□□□ -0.77
Sox2P48432 Gm9785-201ENSMUST00000062642 1006 ntBASIC10.21□□□□□ -0.77
Sox2P48432 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Sox2P48432 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Sox2P48432 Gm21811-201ENSMUST00000096485 930 ntBASIC10.21□□□□□ -0.77
Sox2P48432 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sox2P48432 Aoc1-201ENSMUST00000031835 2675 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sox2P48432 Rnf43-202ENSMUST00000092800 4037 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Sox2P48432 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Sox2P48432 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sox2P48432 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Sox2P48432 Mpp1-202ENSMUST00000114091 1558 ntTSL 2 BASIC10.21□□□□□ -0.78
Sox2P48432 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Sox2P48432 Gpm6b-207ENSMUST00000112229 3203 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sox2P48432 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Sox2P48432 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sox2P48432 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC10.21□□□□□ -0.78
Sox2P48432 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sox2P48432 Dnm2-202ENSMUST00000091087 3450 ntAPPRIS ALT1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sox2P48432 Col11a1-201ENSMUST00000092155 7667 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sox2P48432 Arhgap45-202ENSMUST00000099501 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sox2P48432 Acsl5-201ENSMUST00000043150 4243 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sox2P48432 Spata31d1a-201ENSMUST00000066510 4261 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
Sox2P48432 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Sox2P48432 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sox2P48432 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Sox2P48432 Mst1r-201ENSMUST00000035203 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Sox2P48432 Ube2l3-201ENSMUST00000090192 2609 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sox2P48432 Rbp1-201ENSMUST00000052068 2652 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sox2P48432 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC10.2□□□□□ -0.78
Sox2P48432 Thsd4-201ENSMUST00000034829 4816 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Sox2P48432 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sox2P48432 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC10.2□□□□□ -0.78
Sox2P48432 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC10.2□□□□□ -0.78
Sox2P48432 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Sox2P48432 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Sox2P48432 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Sox2P48432 Pld5-203ENSMUST00000111167 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sox2P48432 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC10.2□□□□□ -0.78
Sox2P48432 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC10.2□□□□□ -0.78
Sox2P48432 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Sox2P48432 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC10.2□□□□□ -0.78
Sox2P48432 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
Sox2P48432 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sox2P48432 Gm23085-201ENSMUST00000157849 293 ntBASIC10.2□□□□□ -0.78
Sox2P48432 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC10.2□□□□□ -0.78
Sox2P48432 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Sox2P48432 Gm21817-201ENSMUST00000178584 2583 ntBASIC10.2□□□□□ -0.78
Sox2P48432 Gm26838-201ENSMUST00000180485 911 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Sox2P48432 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC10.2□□□□□ -0.78
Sox2P48432 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sox2P48432 Zkscan6-201ENSMUST00000018491 2302 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sox2P48432 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC10.2□□□□□ -0.78
Sox2P48432 Gm9540-201ENSMUST00000188230 478 ntBASIC10.2□□□□□ -0.78
Sox2P48432 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC10.2□□□□□ -0.78
Sox2P48432 Gm29067-201ENSMUST00000190821 470 ntBASIC10.2□□□□□ -0.78
Sox2P48432 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC10.2□□□□□ -0.78
Sox2P48432 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC10.2□□□□□ -0.78
Sox2P48432 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Sox2P48432 CT009489.1-201ENSMUST00000227740 1893 ntBASIC10.2□□□□□ -0.78
Sox2P48432 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC10.2□□□□□ -0.78
Sox2P48432 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sox2P48432 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sox2P48432 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sox2P48432 Smg6-201ENSMUST00000045281 5848 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sox2P48432 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sox2P48432 D630003M21Rik-202ENSMUST00000103121 4521 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sox2P48432 Pard3-201ENSMUST00000026921 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sox2P48432 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Sox2P48432 Gm44445-201ENSMUST00000204075 2683 ntBASIC10.2□□□□□ -0.78
Sox2P48432 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sox2P48432 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Sox2P48432 Gm42047-202ENSMUST00000212899 4988 ntTSL 2 BASIC10.19□□□□□ -0.78
Sox2P48432 Grip1-216ENSMUST00000154238 2482 ntTSL 5 BASIC10.19□□□□□ -0.78
Sox2P48432 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Sox2P48432 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sox2P48432 Traf3-201ENSMUST00000021706 7060 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sox2P48432 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Sox2P48432 Rgs12-204ENSMUST00000114281 3439 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sox2P48432 Tubgcp5-205ENSMUST00000205796 3448 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sox2P48432 Qrfpr-203ENSMUST00000197447 1690 ntTSL 5 BASIC10.19□□□□□ -0.78
Sox2P48432 Gm29125-201ENSMUST00000187121 3220 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Sox2P48432 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Sox2P48432 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Sox2P48432 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms