Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 1700126A01Rik-201ENSMUST00000185283 2061 ntBASIC6.99□□□□□ -1.29
Xcl1P47993 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Xcl1P47993 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC6.99□□□□□ -1.29
Xcl1P47993 Zfp507-201ENSMUST00000061586 6693 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Xcl1P47993 Tubd1-205ENSMUST00000167178 1976 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Xcl1P47993 Foxr1-201ENSMUST00000098837 1968 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
Xcl1P47993 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Xcl1P47993 Dubr-202ENSMUST00000186535 2896 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Xcl1P47993 Ctnna2-201ENSMUST00000075340 2864 ntAPPRIS P1 TSL 5 BASIC6.98□□□□□ -1.29
Xcl1P47993 Cacna1f-202ENSMUST00000115726 6079 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Xcl1P47993 Kif1b-201ENSMUST00000030806 6991 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Xcl1P47993 Deptor-202ENSMUST00000096433 8547 ntAPPRIS P4 TSL 1 (best) BASIC6.98□□□□□ -1.29
Xcl1P47993 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Xcl1P47993 Bdp1-204ENSMUST00000109379 7567 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Xcl1P47993 Foxp2-205ENSMUST00000115474 2544 ntTSL 5 BASIC6.98□□□□□ -1.29
Xcl1P47993 Nebl-201ENSMUST00000028080 5780 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Xcl1P47993 Gm45165-201ENSMUST00000207763 1631 ntBASIC6.98□□□□□ -1.29
Xcl1P47993 Psmb11-201ENSMUST00000097177 4247 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Xcl1P47993 Med1-203ENSMUST00000107545 8024 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Xcl1P47993 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Xcl1P47993 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Xcl1P47993 Rimbp2-202ENSMUST00000196085 3732 ntAPPRIS ALT2 TSL 5 BASIC6.98□□□□□ -1.29
Xcl1P47993 Phyhd1-202ENSMUST00000091132 1353 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Xcl1P47993 Gm45746-201ENSMUST00000212623 2447 ntBASIC6.98□□□□□ -1.29
Xcl1P47993 Zfp317-205ENSMUST00000215372 2809 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Xcl1P47993 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Xcl1P47993 Mthfd1-201ENSMUST00000021443 3241 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Xcl1P47993 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Xcl1P47993 Grb2-204ENSMUST00000106499 2333 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Xcl1P47993 Smok3a-202ENSMUST00000171498 2327 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Xcl1P47993 1700020I14Rik-202ENSMUST00000153581 8300 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Xcl1P47993 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Xcl1P47993 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Xcl1P47993 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
Xcl1P47993 Gm4913-201ENSMUST00000117075 1290 ntBASIC6.98□□□□□ -1.29
Xcl1P47993 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Xcl1P47993 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Xcl1P47993 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC6.98□□□□□ -1.29
Xcl1P47993 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC6.98□□□□□ -1.29
Xcl1P47993 Omt2b-203ENSMUST00000187667 727 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Xcl1P47993 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC6.98□□□□□ -1.29
Xcl1P47993 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC6.98□□□□□ -1.29
Xcl1P47993 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Xcl1P47993 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Xcl1P47993 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Xcl1P47993 Btg4-203ENSMUST00000213680 1282 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Xcl1P47993 AC124732.1-201ENSMUST00000221551 910 ntBASIC6.98□□□□□ -1.29
Xcl1P47993 Gm6888-201ENSMUST00000221983 706 ntBASIC6.98□□□□□ -1.29
Xcl1P47993 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC6.98□□□□□ -1.29
Xcl1P47993 Olfr709-ps1-201ENSMUST00000072368 924 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Xcl1P47993 Ep400-204ENSMUST00000112436 10685 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Xcl1P47993 Pard3b-201ENSMUST00000046673 3426 ntTSL 5 BASIC6.98□□□□□ -1.29
Xcl1P47993 Pkp1-203ENSMUST00000163260 3023 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Xcl1P47993 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Xcl1P47993 AC134898.1-201ENSMUST00000223738 1836 ntBASIC6.98□□□□□ -1.29
Xcl1P47993 Vmn1r180-201ENSMUST00000173816 5060 ntAPPRIS P1 BASIC6.98□□□□□ -1.29
Xcl1P47993 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Xcl1P47993 Rassf5-202ENSMUST00000068564 3076 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Xcl1P47993 Fam71f1-201ENSMUST00000090487 1584 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Xcl1P47993 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Xcl1P47993 Slc25a27-201ENSMUST00000024705 2687 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Xcl1P47993 Adamts4-201ENSMUST00000111314 3761 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Xcl1P47993 Tsr2-202ENSMUST00000112683 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Xcl1P47993 Cntnap4-202ENSMUST00000118171 4860 ntAPPRIS ALT1 TSL 5 BASIC6.98□□□□□ -1.29
Xcl1P47993 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Xcl1P47993 BC025920-202ENSMUST00000119492 1895 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Xcl1P47993 Srcap-207ENSMUST00000187040 10654 ntAPPRIS P2 TSL 5 BASIC6.98□□□□□ -1.29
Xcl1P47993 Dpy19l2-201ENSMUST00000133010 3442 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Xcl1P47993 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Xcl1P47993 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
Xcl1P47993 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
Xcl1P47993 Gm42962-201ENSMUST00000201966 2325 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
Xcl1P47993 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Xcl1P47993 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Xcl1P47993 Nolc1-209ENSMUST00000225780 2978 ntAPPRIS ALT2 BASIC6.97□□□□□ -1.29
Xcl1P47993 Limk1-202ENSMUST00000111233 3109 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Xcl1P47993 Aplf-202ENSMUST00000065997 3132 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Xcl1P47993 A430046D13Rik-201ENSMUST00000180477 1997 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Xcl1P47993 Hecw1-201ENSMUST00000110516 9460 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
Xcl1P47993 AC153498.1-201ENSMUST00000219775 2722 ntBASIC6.97□□□□□ -1.29
Xcl1P47993 Ndst2-201ENSMUST00000047490 3305 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Xcl1P47993 D2hgdh-202ENSMUST00000112881 3459 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Xcl1P47993 Ubap2l-203ENSMUST00000090908 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Xcl1P47993 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC6.97□□□□□ -1.29
Xcl1P47993 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
Xcl1P47993 Calr4-204ENSMUST00000106631 2155 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Xcl1P47993 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC6.97□□□□□ -1.29
Xcl1P47993 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC6.97□□□□□ -1.29
Xcl1P47993 Gm14071-201ENSMUST00000117817 509 ntBASIC6.97□□□□□ -1.29
Xcl1P47993 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC6.97□□□□□ -1.29
Xcl1P47993 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC6.97□□□□□ -1.29
Xcl1P47993 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
Xcl1P47993 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Xcl1P47993 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Xcl1P47993 Tdp1-207ENSMUST00000153627 2036 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
Xcl1P47993 Gm22846-201ENSMUST00000157706 270 ntBASIC6.97□□□□□ -1.29
Xcl1P47993 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC6.97□□□□□ -1.29
Xcl1P47993 Mon2-203ENSMUST00000170935 5302 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
Xcl1P47993 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC6.97□□□□□ -1.29
Xcl1P47993 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC6.97□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms