Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Sox18P43680 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox18P43680 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox18P43680 Scaf4-202ENSMUST00000163419 4169 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox18P43680 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox18P43680 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox18P43680 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox18P43680 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox18P43680 AC159810.1-201ENSMUST00000214838 1480 ntBASIC10.88□□□□□ -0.67
Sox18P43680 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Sox18P43680 Ucp1-201ENSMUST00000034146 1636 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox18P43680 Wdr20rt-201ENSMUST00000046331 2228 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox18P43680 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sox18P43680 Trav12-3-201ENSMUST00000103657 442 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Sox18P43680 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC10.88□□□□□ -0.67
Sox18P43680 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox18P43680 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sox18P43680 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox18P43680 Gm12986-201ENSMUST00000119037 967 ntBASIC10.88□□□□□ -0.67
Sox18P43680 Gm13674-201ENSMUST00000121276 823 ntBASIC10.88□□□□□ -0.67
Sox18P43680 Gm12666-201ENSMUST00000123179 764 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Sox18P43680 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sox18P43680 Gm25569-201ENSMUST00000157175 131 ntBASIC10.88□□□□□ -0.67
Sox18P43680 Gm9372-201ENSMUST00000168454 430 ntBASIC10.88□□□□□ -0.67
Sox18P43680 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox18P43680 Tex33-203ENSMUST00000169575 942 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Sox18P43680 Mir8093-201ENSMUST00000185043 137 ntBASIC10.88□□□□□ -0.67
Sox18P43680 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sox18P43680 Gm42640-201ENSMUST00000199792 1195 ntBASIC10.88□□□□□ -0.67
Sox18P43680 Gm43249-201ENSMUST00000200464 458 ntBASIC10.88□□□□□ -0.67
Sox18P43680 Gm45636-201ENSMUST00000210497 1064 ntBASIC10.88□□□□□ -0.67
Sox18P43680 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC10.88□□□□□ -0.67
Sox18P43680 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC10.88□□□□□ -0.67
Sox18P43680 Gm19572-201ENSMUST00000214326 338 ntBASIC10.88□□□□□ -0.67
Sox18P43680 AC168274.2-201ENSMUST00000219252 338 ntTSL 5 BASIC10.88□□□□□ -0.67
Sox18P43680 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC10.88□□□□□ -0.67
Sox18P43680 Gm14005-210ENSMUST00000225087 1413 ntBASIC10.88□□□□□ -0.67
Sox18P43680 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox18P43680 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox18P43680 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox18P43680 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox18P43680 Gm10277-201ENSMUST00000092883 2295 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Sox18P43680 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox18P43680 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sox18P43680 Gm36235-201ENSMUST00000223158 1694 ntTSL 5 BASIC10.88□□□□□ -0.67
Sox18P43680 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox18P43680 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sox18P43680 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC10.88□□□□□ -0.67
Sox18P43680 Klhdc10-206ENSMUST00000144272 1387 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sox18P43680 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Sox18P43680 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Sox18P43680 A830082K12Rik-201ENSMUST00000123998 2203 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Sox18P43680 Nupl1-206ENSMUST00000225111 2936 ntBASIC10.88□□□□□ -0.67
Sox18P43680 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Sox18P43680 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox18P43680 4933440M02Rik-202ENSMUST00000205794 1601 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sox18P43680 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox18P43680 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox18P43680 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Sox18P43680 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox18P43680 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox18P43680 Kcne3-203ENSMUST00000178946 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox18P43680 Cc2d1a-202ENSMUST00000117424 3262 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Sox18P43680 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox18P43680 Srrt-209ENSMUST00000197466 2972 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Sox18P43680 Srrt-212ENSMUST00000199243 2988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox18P43680 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox18P43680 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Sox18P43680 Gm38376-201ENSMUST00000195493 2253 ntBASIC10.87□□□□□ -0.67
Sox18P43680 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox18P43680 Gm28578-201ENSMUST00000187727 2698 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sox18P43680 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Sox18P43680 Spata33-202ENSMUST00000212161 2941 ntTSL 2 BASIC10.87□□□□□ -0.67
Sox18P43680 Tmem92-203ENSMUST00000162809 1437 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox18P43680 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC10.87□□□□□ -0.67
Sox18P43680 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC10.87□□□□□ -0.67
Sox18P43680 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Sox18P43680 Gm22937-201ENSMUST00000103954 131 ntBASIC10.87□□□□□ -0.67
Sox18P43680 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Sox18P43680 Gm12389-201ENSMUST00000117696 418 ntBASIC10.87□□□□□ -0.67
Sox18P43680 Mrps36-ps2-201ENSMUST00000118658 309 ntBASIC10.87□□□□□ -0.67
Sox18P43680 Gm12105-201ENSMUST00000120846 779 ntBASIC10.87□□□□□ -0.67
Sox18P43680 Gm15530-201ENSMUST00000122206 555 ntBASIC10.87□□□□□ -0.67
Sox18P43680 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC10.87□□□□□ -0.67
Sox18P43680 Gm11417-201ENSMUST00000150536 920 ntTSL 2 BASIC10.87□□□□□ -0.67
Sox18P43680 Prl2c5-204ENSMUST00000151144 623 ntTSL 2 BASIC10.87□□□□□ -0.67
Sox18P43680 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC10.87□□□□□ -0.67
Sox18P43680 Ly6i-202ENSMUST00000166694 620 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox18P43680 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox18P43680 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC10.87□□□□□ -0.67
Sox18P43680 Gm26832-201ENSMUST00000181456 1282 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sox18P43680 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Sox18P43680 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Sox18P43680 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Sox18P43680 Gm8234-201ENSMUST00000198523 1107 ntBASIC10.87□□□□□ -0.67
Sox18P43680 Trdv3-201ENSMUST00000198551 309 ntBASIC10.87□□□□□ -0.67
Sox18P43680 2510017J16Rik-201ENSMUST00000198718 1263 ntBASIC10.87□□□□□ -0.67
Sox18P43680 Gm18330-201ENSMUST00000199246 547 ntBASIC10.87□□□□□ -0.67
Sox18P43680 Gm44559-201ENSMUST00000207177 1012 ntBASIC10.87□□□□□ -0.67
Sox18P43680 Gm6290-201ENSMUST00000207666 1158 ntBASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms