Protein–RNA interactions for Protein: P27664

Pde6a, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha, mousemouse

Predictions only

Length 859 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6aP27664 Mir7035-201ENSMUST00000184713 82 ntBASIC12.69□□□□□ -0.38
Pde6aP27664 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC12.69□□□□□ -0.38
Pde6aP27664 Gm42660-201ENSMUST00000197733 947 ntBASIC12.69□□□□□ -0.38
Pde6aP27664 Gm5865-201ENSMUST00000198713 637 ntBASIC12.69□□□□□ -0.38
Pde6aP27664 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Pde6aP27664 Gm8162-201ENSMUST00000213951 665 ntBASIC12.69□□□□□ -0.38
Pde6aP27664 Gm2594-201ENSMUST00000214774 742 ntBASIC12.69□□□□□ -0.38
Pde6aP27664 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC12.69□□□□□ -0.38
Pde6aP27664 Gm5805-201ENSMUST00000072779 456 ntBASIC12.69□□□□□ -0.38
Pde6aP27664 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6aP27664 Gm10699-201ENSMUST00000098916 2130 ntBASIC12.69□□□□□ -0.38
Pde6aP27664 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6aP27664 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Pde6aP27664 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6aP27664 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6aP27664 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6aP27664 Ncdn-201ENSMUST00000030637 3681 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6aP27664 Gm42499-201ENSMUST00000196193 1412 ntBASIC12.69□□□□□ -0.38
Pde6aP27664 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6aP27664 Krt34-201ENSMUST00000056362 1609 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6aP27664 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6aP27664 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6aP27664 Eif2s3y-201ENSMUST00000091197 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6aP27664 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6aP27664 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6aP27664 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Pde6aP27664 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Pde6aP27664 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
Pde6aP27664 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.69□□□□□ -0.38
Pde6aP27664 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6aP27664 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6aP27664 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6aP27664 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6aP27664 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Pde6aP27664 Lig3-210ENSMUST00000173347 3631 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6aP27664 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6aP27664 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Pde6aP27664 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Pde6aP27664 Gm43375-201ENSMUST00000196705 2480 ntBASIC12.68□□□□□ -0.38
Pde6aP27664 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6aP27664 Capza1-201ENSMUST00000094028 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6aP27664 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6aP27664 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Pde6aP27664 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6aP27664 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6aP27664 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC12.68□□□□□ -0.38
Pde6aP27664 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Pde6aP27664 Mir1905-201ENSMUST00000122779 82 ntBASIC12.68□□□□□ -0.38
Pde6aP27664 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6aP27664 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC12.68□□□□□ -0.38
Pde6aP27664 Gm9135-201ENSMUST00000182963 990 ntBASIC12.68□□□□□ -0.38
Pde6aP27664 Gm28166-201ENSMUST00000187637 620 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6aP27664 Gm9116-201ENSMUST00000192400 1018 ntBASIC12.68□□□□□ -0.38
Pde6aP27664 Gm37365-201ENSMUST00000193109 409 ntBASIC12.68□□□□□ -0.38
Pde6aP27664 Gm38321-201ENSMUST00000195053 235 ntBASIC12.68□□□□□ -0.38
Pde6aP27664 Gm5178-201ENSMUST00000219380 898 ntBASIC12.68□□□□□ -0.38
Pde6aP27664 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Pde6aP27664 CT030166.5-201ENSMUST00000222249 420 ntBASIC12.68□□□□□ -0.38
Pde6aP27664 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC12.68□□□□□ -0.38
Pde6aP27664 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Pde6aP27664 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Pde6aP27664 Gm37058-201ENSMUST00000193393 1644 ntBASIC12.68□□□□□ -0.38
Pde6aP27664 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC12.68□□□□□ -0.38
Pde6aP27664 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6aP27664 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6aP27664 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Pde6aP27664 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6aP27664 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6aP27664 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6aP27664 Arhgap33os-201ENSMUST00000124276 2648 ntTSL 2 BASIC12.68□□□□□ -0.38
Pde6aP27664 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6aP27664 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6aP27664 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6aP27664 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6aP27664 3830432H09Rik-202ENSMUST00000188909 2414 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6aP27664 B4galnt2-201ENSMUST00000038343 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6aP27664 Pex2-201ENSMUST00000059021 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Pde6aP27664 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC12.68□□□□□ -0.38
Pde6aP27664 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6aP27664 Satb2-205ENSMUST00000177424 4694 ntTSL 5 BASIC12.67□□□□□ -0.38
Pde6aP27664 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6aP27664 Uqcc1-203ENSMUST00000109632 2313 ntTSL 5 BASIC12.67□□□□□ -0.38
Pde6aP27664 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6aP27664 F730016J06Rik-201ENSMUST00000126140 1344 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6aP27664 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6aP27664 Gm28774-201ENSMUST00000187087 1498 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6aP27664 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6aP27664 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6aP27664 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6aP27664 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6aP27664 Gm12990-201ENSMUST00000120372 468 ntBASIC12.67□□□□□ -0.38
Pde6aP27664 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pde6aP27664 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC12.67□□□□□ -0.38
Pde6aP27664 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Pde6aP27664 Gm28324-201ENSMUST00000187913 264 ntBASIC12.67□□□□□ -0.38
Pde6aP27664 Gm37852-201ENSMUST00000193027 350 ntBASIC12.67□□□□□ -0.38
Pde6aP27664 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC12.67□□□□□ -0.38
Pde6aP27664 4930447C11Rik-201ENSMUST00000204503 928 ntBASIC12.67□□□□□ -0.38
Pde6aP27664 AC154436.1-201ENSMUST00000227272 782 ntBASIC12.67□□□□□ -0.38
Pde6aP27664 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms