Protein–RNA interactions for Protein: P23463

Hoxd8, Homeobox protein Hox-D8, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd8P23463 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxd8P23463 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.44□□□□□ -0.58
Hoxd8P23463 Mfsd14b-203ENSMUST00000155487 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxd8P23463 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxd8P23463 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxd8P23463 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Hoxd8P23463 Gm37264-201ENSMUST00000194916 2192 ntBASIC11.44□□□□□ -0.58
Hoxd8P23463 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxd8P23463 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxd8P23463 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC11.44□□□□□ -0.58
Hoxd8P23463 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxd8P23463 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC11.44□□□□□ -0.58
Hoxd8P23463 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxd8P23463 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxd8P23463 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxd8P23463 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
Hoxd8P23463 Gm37160-201ENSMUST00000193081 1689 ntBASIC11.44□□□□□ -0.58
Hoxd8P23463 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Hoxd8P23463 Blvra-202ENSMUST00000110389 657 ntTSL 3 BASIC11.44□□□□□ -0.58
Hoxd8P23463 Mir1249-201ENSMUST00000116791 98 ntBASIC11.44□□□□□ -0.58
Hoxd8P23463 Olfr1118-201ENSMUST00000121296 996 ntAPPRIS P2 BASIC11.44□□□□□ -0.58
Hoxd8P23463 Gm13827-201ENSMUST00000148801 372 ntBASIC11.44□□□□□ -0.58
Hoxd8P23463 Gm26313-201ENSMUST00000157770 308 ntBASIC11.44□□□□□ -0.58
Hoxd8P23463 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxd8P23463 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC11.44□□□□□ -0.58
Hoxd8P23463 Gm7572-201ENSMUST00000182616 766 ntBASIC11.44□□□□□ -0.58
Hoxd8P23463 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxd8P23463 Gm38313-201ENSMUST00000191953 1266 ntBASIC11.44□□□□□ -0.58
Hoxd8P23463 Gm37751-201ENSMUST00000192440 1198 ntBASIC11.44□□□□□ -0.58
Hoxd8P23463 Gm37197-201ENSMUST00000195607 401 ntBASIC11.44□□□□□ -0.58
Hoxd8P23463 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC11.44□□□□□ -0.58
Hoxd8P23463 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxd8P23463 AC154441.1-201ENSMUST00000223653 1006 ntBASIC11.44□□□□□ -0.58
Hoxd8P23463 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxd8P23463 Vmn1r35-201ENSMUST00000071414 891 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Hoxd8P23463 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Hoxd8P23463 Nme5-201ENSMUST00000079287 843 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxd8P23463 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Hoxd8P23463 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Hoxd8P23463 Gm45165-201ENSMUST00000207763 1631 ntBASIC11.44□□□□□ -0.58
Hoxd8P23463 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
Hoxd8P23463 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxd8P23463 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxd8P23463 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxd8P23463 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Hoxd8P23463 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxd8P23463 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxd8P23463 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.44□□□□□ -0.58
Hoxd8P23463 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxd8P23463 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxd8P23463 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxd8P23463 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxd8P23463 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxd8P23463 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Hoxd8P23463 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxd8P23463 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxd8P23463 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxd8P23463 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Hoxd8P23463 Ackr3-201ENSMUST00000065587 3065 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxd8P23463 CT573086.2-201ENSMUST00000227277 4992 ntBASIC11.44□□□□□ -0.58
Hoxd8P23463 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hoxd8P23463 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Hoxd8P23463 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxd8P23463 Mast1-201ENSMUST00000109741 4872 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxd8P23463 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxd8P23463 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxd8P23463 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC11.43□□□□□ -0.58
Hoxd8P23463 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.43□□□□□ -0.58
Hoxd8P23463 Cts3-202ENSMUST00000223815 1367 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
Hoxd8P23463 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxd8P23463 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxd8P23463 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxd8P23463 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxd8P23463 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Hoxd8P23463 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxd8P23463 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxd8P23463 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxd8P23463 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxd8P23463 Gm8684-201ENSMUST00000195078 1564 ntBASIC11.43□□□□□ -0.58
Hoxd8P23463 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Hoxd8P23463 Gm23769-201ENSMUST00000104441 121 ntBASIC11.43□□□□□ -0.58
Hoxd8P23463 Gm12028-201ENSMUST00000118065 436 ntBASIC11.43□□□□□ -0.58
Hoxd8P23463 Gm13204-201ENSMUST00000120110 821 ntBASIC11.43□□□□□ -0.58
Hoxd8P23463 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxd8P23463 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC11.43□□□□□ -0.58
Hoxd8P23463 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxd8P23463 Gm23673-201ENSMUST00000157474 298 ntBASIC11.43□□□□□ -0.58
Hoxd8P23463 9530085P06Rik-201ENSMUST00000182121 827 ntBASIC11.43□□□□□ -0.58
Hoxd8P23463 Gm27316-201ENSMUST00000184884 277 ntBASIC11.43□□□□□ -0.58
Hoxd8P23463 Auts2-216ENSMUST00000185450 144 ntTSL 5 BASIC11.43□□□□□ -0.58
Hoxd8P23463 Gm28258-201ENSMUST00000189033 587 ntTSL 3 BASIC11.43□□□□□ -0.58
Hoxd8P23463 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxd8P23463 Gm37631-201ENSMUST00000192275 364 ntBASIC11.43□□□□□ -0.58
Hoxd8P23463 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC11.43□□□□□ -0.58
Hoxd8P23463 Gm37215-201ENSMUST00000194927 1259 ntBASIC11.43□□□□□ -0.58
Hoxd8P23463 Gm42833-201ENSMUST00000196019 2124 ntBASIC11.43□□□□□ -0.58
Hoxd8P23463 Gm18555-201ENSMUST00000197935 584 ntBASIC11.43□□□□□ -0.58
Hoxd8P23463 Gm42588-201ENSMUST00000200538 1297 ntBASIC11.43□□□□□ -0.58
Hoxd8P23463 Gm5907-202ENSMUST00000210969 661 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hoxd8P23463 AC153899.1-201ENSMUST00000214092 1117 ntBASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms