Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Tcl1b4-202ENSMUST00000222867 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc9P09633 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc9P09633 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc9P09633 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc9P09633 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc9P09633 Gm6768-201ENSMUST00000022467 1878 ntBASIC14.13□□□□□ -0.15
Hoxc9P09633 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC14.13□□□□□ -0.15
Hoxc9P09633 Olfr1372-ps1-201ENSMUST00000121007 934 ntBASIC14.13□□□□□ -0.15
Hoxc9P09633 Gm16305-201ENSMUST00000140747 556 ntBASIC14.13□□□□□ -0.15
Hoxc9P09633 Gm5976-201ENSMUST00000180794 996 ntBASIC14.13□□□□□ -0.15
Hoxc9P09633 Gm4960-201ENSMUST00000182928 1001 ntBASIC14.13□□□□□ -0.15
Hoxc9P09633 Gm8756-201ENSMUST00000183250 929 ntBASIC14.13□□□□□ -0.15
Hoxc9P09633 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC14.13□□□□□ -0.15
Hoxc9P09633 Vmn1r206-201ENSMUST00000187140 1135 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Hoxc9P09633 Gm42710-201ENSMUST00000200608 985 ntBASIC14.13□□□□□ -0.15
Hoxc9P09633 Gm43811-201ENSMUST00000202862 695 ntBASIC14.13□□□□□ -0.15
Hoxc9P09633 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC14.13□□□□□ -0.15
Hoxc9P09633 AC164883.7-201ENSMUST00000228534 851 ntBASIC14.13□□□□□ -0.15
Hoxc9P09633 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc9P09633 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc9P09633 Prdx2-201ENSMUST00000005292 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc9P09633 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc9P09633 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc9P09633 Ddx55-201ENSMUST00000071057 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc9P09633 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc9P09633 Gm8122-201ENSMUST00000165988 1404 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Hoxc9P09633 Cald1-205ENSMUST00000115027 4777 ntTSL 5 BASIC14.13□□□□□ -0.15
Hoxc9P09633 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc9P09633 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc9P09633 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc9P09633 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc9P09633 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc9P09633 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc9P09633 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc9P09633 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc9P09633 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc9P09633 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Hoxc9P09633 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc9P09633 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc9P09633 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC14.12□□□□□ -0.15
Hoxc9P09633 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Hoxc9P09633 Ppid-201ENSMUST00000029382 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc9P09633 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc9P09633 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc9P09633 Mapk1ip1-201ENSMUST00000075667 1502 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc9P09633 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc9P09633 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc9P09633 Gm13272-201ENSMUST00000179425 811 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Hoxc9P09633 Gm26725-201ENSMUST00000180652 1113 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc9P09633 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC14.12□□□□□ -0.15
Hoxc9P09633 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc9P09633 Gm42859-201ENSMUST00000199572 193 ntBASIC14.12□□□□□ -0.15
Hoxc9P09633 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC14.12□□□□□ -0.15
Hoxc9P09633 Gm43275-201ENSMUST00000202053 1020 ntBASIC14.12□□□□□ -0.15
Hoxc9P09633 Gm45481-201ENSMUST00000209717 877 ntBASIC14.12□□□□□ -0.15
Hoxc9P09633 Gm18122-201ENSMUST00000211390 904 ntBASIC14.12□□□□□ -0.15
Hoxc9P09633 AC125409.3-201ENSMUST00000223488 653 ntBASIC14.12□□□□□ -0.15
Hoxc9P09633 AC133496.1-201ENSMUST00000223891 743 ntBASIC14.12□□□□□ -0.15
Hoxc9P09633 AC117769.1-201ENSMUST00000224716 1120 ntBASIC14.12□□□□□ -0.15
Hoxc9P09633 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc9P09633 Gm5513-201ENSMUST00000072982 1218 ntBASIC14.12□□□□□ -0.15
Hoxc9P09633 Gm22341-201ENSMUST00000083775 129 ntBASIC14.12□□□□□ -0.15
Hoxc9P09633 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Hoxc9P09633 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc9P09633 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc9P09633 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc9P09633 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc9P09633 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Hoxc9P09633 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc9P09633 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc9P09633 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
Hoxc9P09633 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc9P09633 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc9P09633 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc9P09633 Gm13169-201ENSMUST00000122090 1459 ntBASIC14.12□□□□□ -0.15
Hoxc9P09633 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Hoxc9P09633 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Hoxc9P09633 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc9P09633 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC14.11□□□□□ -0.15
Hoxc9P09633 Gm45743-201ENSMUST00000212701 2795 ntBASIC14.11□□□□□ -0.15
Hoxc9P09633 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc9P09633 CT573086.2-201ENSMUST00000227277 4992 ntBASIC14.11□□□□□ -0.15
Hoxc9P09633 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc9P09633 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc9P09633 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc9P09633 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc9P09633 Il15ra-203ENSMUST00000114831 882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc9P09633 Olfr874-201ENSMUST00000115004 933 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Hoxc9P09633 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc9P09633 Gm14176-201ENSMUST00000121302 477 ntBASIC14.11□□□□□ -0.15
Hoxc9P09633 Gm12009-201ENSMUST00000121361 1100 ntBASIC14.11□□□□□ -0.15
Hoxc9P09633 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC14.11□□□□□ -0.15
Hoxc9P09633 C030037D09Rik-203ENSMUST00000138007 3220 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc9P09633 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc9P09633 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC14.11□□□□□ -0.15
Hoxc9P09633 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC14.11□□□□□ -0.15
Hoxc9P09633 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC14.11□□□□□ -0.15
Hoxc9P09633 6820431F20Rik-201ENSMUST00000150051 936 ntBASIC14.11□□□□□ -0.15
Hoxc9P09633 Gzmn-201ENSMUST00000015587 956 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Hoxc9P09633 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms