Protein–RNA interactions for Protein: P01872

Ighm, Ig mu chain C region, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IghmP01872 Scgb2b27-203ENSMUST00000185399 702 ntAPPRIS ALT2 TSL 2 BASIC10.23□□□□□ -0.77
IghmP01872 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC10.23□□□□□ -0.77
IghmP01872 Gm17826-201ENSMUST00000189720 798 ntBASIC10.23□□□□□ -0.77
IghmP01872 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC10.23□□□□□ -0.77
IghmP01872 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC10.23□□□□□ -0.77
IghmP01872 Gm44980-201ENSMUST00000205826 314 ntBASIC10.23□□□□□ -0.77
IghmP01872 AC159819.2-201ENSMUST00000216151 342 ntBASIC10.23□□□□□ -0.77
IghmP01872 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC10.23□□□□□ -0.77
IghmP01872 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC10.23□□□□□ -0.77
IghmP01872 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
IghmP01872 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
IghmP01872 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC10.23□□□□□ -0.77
IghmP01872 Gm7405-201ENSMUST00000121476 1337 ntBASIC10.23□□□□□ -0.77
IghmP01872 Gm6655-201ENSMUST00000201932 1309 ntBASIC10.23□□□□□ -0.77
IghmP01872 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
IghmP01872 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC10.23□□□□□ -0.77
IghmP01872 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC10.23□□□□□ -0.77
IghmP01872 Gm19027-201ENSMUST00000187291 1355 ntBASIC10.23□□□□□ -0.77
IghmP01872 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
IghmP01872 Gm13104-201ENSMUST00000119651 1446 ntBASIC10.23□□□□□ -0.77
IghmP01872 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
IghmP01872 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
IghmP01872 Olfr272-202ENSMUST00000107667 1936 ntAPPRIS P1 TSL 3 BASIC10.23□□□□□ -0.77
IghmP01872 Gemin8-202ENSMUST00000087169 1928 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
IghmP01872 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
IghmP01872 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
IghmP01872 Gmip-202ENSMUST00000123453 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.23□□□□□ -0.77
IghmP01872 Plekha5-201ENSMUST00000087622 7382 ntAPPRIS P1 TSL 5 BASIC10.23□□□□□ -0.77
IghmP01872 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
IghmP01872 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
IghmP01872 Sh2d3c-202ENSMUST00000113242 3107 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
IghmP01872 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC10.22□□□□□ -0.77
IghmP01872 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
IghmP01872 Slc7a4-201ENSMUST00000063544 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
IghmP01872 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC10.22□□□□□ -0.77
IghmP01872 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
IghmP01872 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
IghmP01872 AC122382.1-201ENSMUST00000225869 2371 ntBASIC10.22□□□□□ -0.77
IghmP01872 Tldc1-201ENSMUST00000049156 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
IghmP01872 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC10.22□□□□□ -0.77
IghmP01872 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
IghmP01872 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
IghmP01872 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
IghmP01872 Gm15881-201ENSMUST00000148792 942 ntBASIC10.22□□□□□ -0.77
IghmP01872 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC10.22□□□□□ -0.77
IghmP01872 Gm38319-201ENSMUST00000194537 1266 ntBASIC10.22□□□□□ -0.77
IghmP01872 Gm7047-201ENSMUST00000196224 1063 ntBASIC10.22□□□□□ -0.77
IghmP01872 Gm42423-201ENSMUST00000196396 670 ntTSL 3 BASIC10.22□□□□□ -0.77
IghmP01872 AC118476.3-201ENSMUST00000216419 1219 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
IghmP01872 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC10.22□□□□□ -0.77
IghmP01872 Gm1000-202ENSMUST00000222329 757 ntTSL 5 BASIC10.22□□□□□ -0.77
IghmP01872 AC129975.1-201ENSMUST00000224816 592 ntBASIC10.22□□□□□ -0.77
IghmP01872 AC159196.1-201ENSMUST00000225524 377 ntBASIC10.22□□□□□ -0.77
IghmP01872 AC171241.1-201ENSMUST00000228144 1166 ntBASIC10.22□□□□□ -0.77
IghmP01872 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
IghmP01872 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
IghmP01872 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
IghmP01872 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
IghmP01872 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
IghmP01872 5730403I07Rik-201ENSMUST00000183878 2033 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
IghmP01872 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
IghmP01872 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
IghmP01872 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC10.22□□□□□ -0.77
IghmP01872 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
IghmP01872 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
IghmP01872 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC10.22□□□□□ -0.77
IghmP01872 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC10.22□□□□□ -0.77
IghmP01872 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
IghmP01872 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
IghmP01872 Zfp830-201ENSMUST00000056677 1591 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
IghmP01872 Gm43052-201ENSMUST00000201451 1628 ntBASIC10.22□□□□□ -0.77
IghmP01872 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
IghmP01872 Nln-205ENSMUST00000224945 2486 ntBASIC10.22□□□□□ -0.77
IghmP01872 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
IghmP01872 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
IghmP01872 Sirpa-201ENSMUST00000049262 3644 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
IghmP01872 Qrfpr-201ENSMUST00000091227 1839 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
IghmP01872 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
IghmP01872 Pcdhgb8-201ENSMUST00000195764 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
IghmP01872 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
IghmP01872 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.21□□□□□ -0.77
IghmP01872 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
IghmP01872 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
IghmP01872 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
IghmP01872 Ehbp1-202ENSMUST00000109563 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
IghmP01872 Fam228a-201ENSMUST00000111154 3004 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
IghmP01872 Abcf1-201ENSMUST00000043757 3161 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
IghmP01872 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
IghmP01872 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
IghmP01872 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
IghmP01872 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
IghmP01872 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
IghmP01872 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC10.21□□□□□ -0.77
IghmP01872 Mir1893-201ENSMUST00000122565 83 ntBASIC10.21□□□□□ -0.77
IghmP01872 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC10.21□□□□□ -0.77
IghmP01872 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
IghmP01872 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
IghmP01872 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC10.21□□□□□ -0.77
IghmP01872 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC10.21□□□□□ -0.77
IghmP01872 Gm4812-201ENSMUST00000182847 993 ntBASIC10.21□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms