Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
TcraP01849 Zfp512-201ENSMUST00000076264 3299 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
TcraP01849 Ppp1r3c-201ENSMUST00000087321 2719 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
TcraP01849 Synpo2-203ENSMUST00000106427 6937 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
TcraP01849 Gm1840-201ENSMUST00000051687 1432 ntBASIC7.97□□□□□ -1.13
TcraP01849 Gm21817-201ENSMUST00000178584 2583 ntBASIC7.97□□□□□ -1.13
TcraP01849 Stx16-201ENSMUST00000044638 3731 ntAPPRIS ALT2 TSL 5 BASIC7.97□□□□□ -1.13
TcraP01849 AC174797.1-201ENSMUST00000224339 1649 ntBASIC7.97□□□□□ -1.13
TcraP01849 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
TcraP01849 Lhfpl2-201ENSMUST00000054274 4348 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
TcraP01849 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
TcraP01849 Slc34a2-201ENSMUST00000094787 4176 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
TcraP01849 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
TcraP01849 Chchd7-202ENSMUST00000108386 524 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
TcraP01849 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
TcraP01849 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC7.97□□□□□ -1.13
TcraP01849 Chchd7-206ENSMUST00000121110 381 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
TcraP01849 Gm14381-201ENSMUST00000122105 414 ntBASIC7.97□□□□□ -1.13
TcraP01849 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC7.97□□□□□ -1.13
TcraP01849 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
TcraP01849 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
TcraP01849 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
TcraP01849 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC7.97□□□□□ -1.13
TcraP01849 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
TcraP01849 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC7.97□□□□□ -1.13
TcraP01849 Gm27516-201ENSMUST00000184237 98 ntBASIC7.97□□□□□ -1.13
TcraP01849 Gm28937-201ENSMUST00000185413 695 ntBASIC7.97□□□□□ -1.13
TcraP01849 Gm29400-201ENSMUST00000187208 695 ntBASIC7.97□□□□□ -1.13
TcraP01849 Gm28662-201ENSMUST00000188446 695 ntBASIC7.97□□□□□ -1.13
TcraP01849 Gm28251-201ENSMUST00000188835 695 ntBASIC7.97□□□□□ -1.13
TcraP01849 Gm37318-201ENSMUST00000194325 695 ntBASIC7.97□□□□□ -1.13
TcraP01849 Gm38017-201ENSMUST00000194768 695 ntBASIC7.97□□□□□ -1.13
TcraP01849 Gm37287-201ENSMUST00000195449 695 ntBASIC7.97□□□□□ -1.13
TcraP01849 Gm37793-201ENSMUST00000195548 695 ntBASIC7.97□□□□□ -1.13
TcraP01849 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC7.97□□□□□ -1.13
TcraP01849 Gm8956-201ENSMUST00000203939 825 ntBASIC7.97□□□□□ -1.13
TcraP01849 Gm44008-201ENSMUST00000204345 412 ntBASIC7.97□□□□□ -1.13
TcraP01849 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC7.97□□□□□ -1.13
TcraP01849 Gm6334-201ENSMUST00000207083 228 ntBASIC7.97□□□□□ -1.13
TcraP01849 Gm45598-202ENSMUST00000210719 986 ntBASIC7.97□□□□□ -1.13
TcraP01849 Gm2553-201ENSMUST00000215986 605 ntBASIC7.97□□□□□ -1.13
TcraP01849 Ggps1-204ENSMUST00000221713 667 ntTSL 3 BASIC7.97□□□□□ -1.13
TcraP01849 Gzmn-202ENSMUST00000225535 989 ntBASIC7.97□□□□□ -1.13
TcraP01849 CT025533.2-201ENSMUST00000228715 1248 ntBASIC7.97□□□□□ -1.13
TcraP01849 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
TcraP01849 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC7.97□□□□□ -1.13
TcraP01849 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
TcraP01849 Glyctk-201ENSMUST00000036382 4209 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
TcraP01849 Aoc1-201ENSMUST00000031835 2675 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
TcraP01849 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
TcraP01849 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
TcraP01849 C230021G24Rik-201ENSMUST00000181196 3679 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
TcraP01849 Ctnnd1-207ENSMUST00000111676 5852 ntTSL 5 BASIC7.97□□□□□ -1.13
TcraP01849 Fam90a1b-201ENSMUST00000044989 2939 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
TcraP01849 Dock4-204ENSMUST00000220912 7360 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
TcraP01849 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
TcraP01849 Fam227a-203ENSMUST00000109648 5187 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
TcraP01849 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC7.97□□□□□ -1.13
TcraP01849 4933407K13Rik-203ENSMUST00000138943 4364 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
TcraP01849 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
TcraP01849 Gm7357-201ENSMUST00000195361 2991 ntBASIC7.97□□□□□ -1.13
TcraP01849 Cog5-201ENSMUST00000036862 2997 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
TcraP01849 Trem1-201ENSMUST00000048782 2993 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
TcraP01849 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC7.97□□□□□ -1.13
TcraP01849 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
TcraP01849 Gm3372-201ENSMUST00000198806 1792 ntBASIC7.97□□□□□ -1.13
TcraP01849 Mmp21-202ENSMUST00000122136 1599 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
TcraP01849 Pcdhgc5-201ENSMUST00000055935 4741 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
TcraP01849 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
TcraP01849 Serpinc1-201ENSMUST00000064725 4970 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
TcraP01849 Dio2-201ENSMUST00000082432 5815 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
TcraP01849 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC7.97□□□□□ -1.13
TcraP01849 Gm43660-201ENSMUST00000200956 6548 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
TcraP01849 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
TcraP01849 Doxl2-203ENSMUST00000184917 2468 ntAPPRIS P1 TSL 3 BASIC7.96□□□□□ -1.13
TcraP01849 Nup188-201ENSMUST00000064447 5710 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
TcraP01849 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
TcraP01849 Tchhl1-201ENSMUST00000029516 2066 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
TcraP01849 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
TcraP01849 Tyw3-204ENSMUST00000170461 4270 ntTSL 5 BASIC7.96□□□□□ -1.13
TcraP01849 Rab27a-201ENSMUST00000034722 2979 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
TcraP01849 Adamtsl4-201ENSMUST00000015994 3856 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
TcraP01849 Tnk2-206ENSMUST00000115125 4313 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
TcraP01849 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
TcraP01849 Pklr-201ENSMUST00000047111 2787 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
TcraP01849 Rcan2-201ENSMUST00000044792 3237 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
TcraP01849 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
TcraP01849 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
TcraP01849 Itih3-205ENSMUST00000227995 2100 ntAPPRIS ALT2 BASIC7.96□□□□□ -1.13
TcraP01849 Bfar-201ENSMUST00000023365 3003 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
TcraP01849 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
TcraP01849 0610030E20Rik-201ENSMUST00000077783 4605 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
TcraP01849 Atg4b-201ENSMUST00000027502 4173 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
TcraP01849 Exoc7-203ENSMUST00000106413 3298 ntAPPRIS ALT1 TSL 5 BASIC7.96□□□□□ -1.13
TcraP01849 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
TcraP01849 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC7.96□□□□□ -1.13
TcraP01849 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
TcraP01849 Pcdh18-202ENSMUST00000191794 5146 ntTSL 5 BASIC7.96□□□□□ -1.14
TcraP01849 Oxsm-201ENSMUST00000022311 3759 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
TcraP01849 Exoc7-201ENSMUST00000021147 3337 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 168.8 ms