Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 AC122382.1-201ENSMUST00000225869 2371 ntBASIC9.9□□□□□ -0.82
Rnf13O54965 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC9.9□□□□□ -0.82
Rnf13O54965 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Rnf13O54965 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC9.9□□□□□ -0.82
Rnf13O54965 Fam234a-202ENSMUST00000118487 2629 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rnf13O54965 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Rnf13O54965 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Rnf13O54965 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rnf13O54965 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Rnf13O54965 Cutal-203ENSMUST00000113068 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rnf13O54965 Gm10827-201ENSMUST00000181897 2586 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Rnf13O54965 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Rnf13O54965 Usp47-206ENSMUST00000215510 4697 ntTSL 5 BASIC9.9□□□□□ -0.82
Rnf13O54965 Gnas-223ENSMUST00000185956 3729 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Rnf13O54965 Gnas-224ENSMUST00000186907 3729 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Rnf13O54965 Hmgcll1-201ENSMUST00000008052 3737 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rnf13O54965 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Rnf13O54965 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC9.9□□□□□ -0.82
Rnf13O54965 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rnf13O54965 Ampd2-203ENSMUST00000102638 3650 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rnf13O54965 Nek4-207ENSMUST00000228328 4245 ntAPPRIS P2 BASIC9.9□□□□□ -0.82
Rnf13O54965 Gm43375-201ENSMUST00000196705 2480 ntBASIC9.9□□□□□ -0.82
Rnf13O54965 Gm6768-201ENSMUST00000022467 1878 ntBASIC9.9□□□□□ -0.82
Rnf13O54965 CT009489.1-201ENSMUST00000227740 1893 ntBASIC9.9□□□□□ -0.82
Rnf13O54965 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rnf13O54965 Gm15515-201ENSMUST00000117827 822 ntBASIC9.9□□□□□ -0.82
Rnf13O54965 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC9.9□□□□□ -0.82
Rnf13O54965 Gm11244-201ENSMUST00000121243 237 ntBASIC9.9□□□□□ -0.82
Rnf13O54965 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC9.9□□□□□ -0.82
Rnf13O54965 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Rnf13O54965 Gm16275-201ENSMUST00000147774 712 ntTSL 3 BASIC9.9□□□□□ -0.82
Rnf13O54965 Gm17040-202ENSMUST00000170597 889 ntBASIC9.9□□□□□ -0.82
Rnf13O54965 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC9.9□□□□□ -0.82
Rnf13O54965 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC9.9□□□□□ -0.82
Rnf13O54965 Gm21778-201ENSMUST00000178779 471 ntBASIC9.9□□□□□ -0.82
Rnf13O54965 3110045C21Rik-201ENSMUST00000180638 1135 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Rnf13O54965 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC9.9□□□□□ -0.82
Rnf13O54965 Gm29067-201ENSMUST00000190821 470 ntBASIC9.9□□□□□ -0.82
Rnf13O54965 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC9.9□□□□□ -0.82
Rnf13O54965 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC9.9□□□□□ -0.82
Rnf13O54965 Gm44506-201ENSMUST00000206278 965 ntBASIC9.9□□□□□ -0.82
Rnf13O54965 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC9.9□□□□□ -0.82
Rnf13O54965 Gm9111-201ENSMUST00000219394 709 ntBASIC9.9□□□□□ -0.82
Rnf13O54965 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC9.9□□□□□ -0.82
Rnf13O54965 AC154436.1-201ENSMUST00000227272 782 ntBASIC9.9□□□□□ -0.82
Rnf13O54965 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rnf13O54965 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rnf13O54965 Gm9785-201ENSMUST00000062642 1006 ntBASIC9.9□□□□□ -0.82
Rnf13O54965 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rnf13O54965 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC9.9□□□□□ -0.82
Rnf13O54965 Gm7742-201ENSMUST00000167648 1527 ntBASIC9.9□□□□□ -0.82
Rnf13O54965 Gm7732-201ENSMUST00000170486 1527 ntBASIC9.9□□□□□ -0.82
Rnf13O54965 Gm7740-201ENSMUST00000186171 1527 ntBASIC9.9□□□□□ -0.82
Rnf13O54965 Gm7736-201ENSMUST00000096981 1527 ntBASIC9.9□□□□□ -0.82
Rnf13O54965 Ttll9-201ENSMUST00000099197 1797 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rnf13O54965 Zmym6-201ENSMUST00000046751 4210 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Rnf13O54965 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Rnf13O54965 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Rnf13O54965 Shroom2-201ENSMUST00000062317 6997 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Rnf13O54965 Zfyve1-201ENSMUST00000048319 4036 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Rnf13O54965 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Rnf13O54965 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC9.9□□□□□ -0.83
Rnf13O54965 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC9.9□□□□□ -0.83
Rnf13O54965 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.83
Rnf13O54965 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Rnf13O54965 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC9.9□□□□□ -0.83
Rnf13O54965 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rnf13O54965 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC9.89□□□□□ -0.83
Rnf13O54965 Gm6903-201ENSMUST00000160509 1366 ntBASIC9.89□□□□□ -0.83
Rnf13O54965 Gm5822-201ENSMUST00000161562 1378 ntBASIC9.89□□□□□ -0.83
Rnf13O54965 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Rnf13O54965 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC9.89□□□□□ -0.83
Rnf13O54965 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Rnf13O54965 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rnf13O54965 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rnf13O54965 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Rnf13O54965 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC9.89□□□□□ -0.83
Rnf13O54965 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rnf13O54965 Otog-201ENSMUST00000164538 10043 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
Rnf13O54965 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC9.89□□□□□ -0.83
Rnf13O54965 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rnf13O54965 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rnf13O54965 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC9.89□□□□□ -0.83
Rnf13O54965 Gm15595-201ENSMUST00000120840 961 ntBASIC9.89□□□□□ -0.83
Rnf13O54965 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC9.89□□□□□ -0.83
Rnf13O54965 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Rnf13O54965 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC9.89□□□□□ -0.83
Rnf13O54965 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Rnf13O54965 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC9.89□□□□□ -0.83
Rnf13O54965 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC9.89□□□□□ -0.83
Rnf13O54965 1110038B12Rik-208ENSMUST00000174714 520 ntTSL 2 BASIC9.89□□□□□ -0.83
Rnf13O54965 Gm23694-201ENSMUST00000179335 110 ntBASIC9.89□□□□□ -0.83
Rnf13O54965 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC9.89□□□□□ -0.83
Rnf13O54965 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rnf13O54965 Gm6905-201ENSMUST00000205729 511 ntBASIC9.89□□□□□ -0.83
Rnf13O54965 Gm45909-201ENSMUST00000212413 1031 ntBASIC9.89□□□□□ -0.83
Rnf13O54965 CT573047.1-201ENSMUST00000223652 851 ntBASIC9.89□□□□□ -0.83
Rnf13O54965 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
Rnf13O54965 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
Rnf13O54965 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC9.89□□□□□ -0.83
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms