Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.14■□□□□ 0.82
H2afb2S4R1M3 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
H2afb2S4R1M3 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
H2afb2S4R1M3 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
H2afb2S4R1M3 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
H2afb2S4R1M3 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
H2afb2S4R1M3 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.14■□□□□ 0.81
H2afb2S4R1M3 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.14■□□□□ 0.81
H2afb2S4R1M3 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.14■□□□□ 0.81
H2afb2S4R1M3 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.14■□□□□ 0.81
H2afb2S4R1M3 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
H2afb2S4R1M3 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
H2afb2S4R1M3 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
H2afb2S4R1M3 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
H2afb2S4R1M3 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
H2afb2S4R1M3 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.13■□□□□ 0.81
H2afb2S4R1M3 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
H2afb2S4R1M3 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
H2afb2S4R1M3 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.13■□□□□ 0.81
H2afb2S4R1M3 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
H2afb2S4R1M3 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.13■□□□□ 0.81
H2afb2S4R1M3 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.13■□□□□ 0.81
H2afb2S4R1M3 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.13■□□□□ 0.81
H2afb2S4R1M3 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
H2afb2S4R1M3 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
H2afb2S4R1M3 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
H2afb2S4R1M3 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
H2afb2S4R1M3 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
H2afb2S4R1M3 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
H2afb2S4R1M3 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
H2afb2S4R1M3 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
H2afb2S4R1M3 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
H2afb2S4R1M3 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.12■□□□□ 0.81
H2afb2S4R1M3 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
H2afb2S4R1M3 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
H2afb2S4R1M3 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
H2afb2S4R1M3 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
H2afb2S4R1M3 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
H2afb2S4R1M3 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
H2afb2S4R1M3 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.11■□□□□ 0.81
H2afb2S4R1M3 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
H2afb2S4R1M3 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
H2afb2S4R1M3 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
H2afb2S4R1M3 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
H2afb2S4R1M3 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
H2afb2S4R1M3 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
H2afb2S4R1M3 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
H2afb2S4R1M3 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
H2afb2S4R1M3 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
H2afb2S4R1M3 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.1■□□□□ 0.81
H2afb2S4R1M3 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
H2afb2S4R1M3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
H2afb2S4R1M3 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
H2afb2S4R1M3 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
H2afb2S4R1M3 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
H2afb2S4R1M3 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
H2afb2S4R1M3 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
H2afb2S4R1M3 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
H2afb2S4R1M3 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
H2afb2S4R1M3 Gm43530-201ENSMUST00000195920 274 ntBASIC20.09■□□□□ 0.81
H2afb2S4R1M3 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
H2afb2S4R1M3 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
H2afb2S4R1M3 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
H2afb2S4R1M3 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
H2afb2S4R1M3 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.08■□□□□ 0.81
H2afb2S4R1M3 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
H2afb2S4R1M3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
H2afb2S4R1M3 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
H2afb2S4R1M3 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
H2afb2S4R1M3 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
H2afb2S4R1M3 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
H2afb2S4R1M3 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.07■□□□□ 0.8
H2afb2S4R1M3 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.07■□□□□ 0.8
H2afb2S4R1M3 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
H2afb2S4R1M3 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.07■□□□□ 0.8
H2afb2S4R1M3 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
H2afb2S4R1M3 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
H2afb2S4R1M3 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
H2afb2S4R1M3 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
H2afb2S4R1M3 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
H2afb2S4R1M3 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
H2afb2S4R1M3 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
H2afb2S4R1M3 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
H2afb2S4R1M3 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
H2afb2S4R1M3 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
H2afb2S4R1M3 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
H2afb2S4R1M3 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
H2afb2S4R1M3 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
H2afb2S4R1M3 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
H2afb2S4R1M3 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
H2afb2S4R1M3 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
H2afb2S4R1M3 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
H2afb2S4R1M3 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
H2afb2S4R1M3 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
H2afb2S4R1M3 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
H2afb2S4R1M3 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
H2afb2S4R1M3 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
H2afb2S4R1M3 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.05■□□□□ 0.8
H2afb2S4R1M3 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.05■□□□□ 0.8
H2afb2S4R1M3 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms