Protein–RNA interactions for Protein: Q9Z262

Cldn6, Claudin-6, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn6Q9Z262 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Cldn6Q9Z262 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Cldn6Q9Z262 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.88■□□□□ 0.61
Cldn6Q9Z262 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Cldn6Q9Z262 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Cldn6Q9Z262 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC18.87■□□□□ 0.61
Cldn6Q9Z262 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cldn6Q9Z262 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cldn6Q9Z262 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cldn6Q9Z262 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cldn6Q9Z262 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Cldn6Q9Z262 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Cldn6Q9Z262 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.87■□□□□ 0.61
Cldn6Q9Z262 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Cldn6Q9Z262 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cldn6Q9Z262 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Cldn6Q9Z262 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cldn6Q9Z262 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cldn6Q9Z262 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cldn6Q9Z262 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cldn6Q9Z262 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC18.86■□□□□ 0.61
Cldn6Q9Z262 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.86■□□□□ 0.61
Cldn6Q9Z262 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Cldn6Q9Z262 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Cldn6Q9Z262 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC18.85■□□□□ 0.61
Cldn6Q9Z262 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cldn6Q9Z262 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.85■□□□□ 0.61
Cldn6Q9Z262 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC18.85■□□□□ 0.61
Cldn6Q9Z262 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC18.85■□□□□ 0.61
Cldn6Q9Z262 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Cldn6Q9Z262 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cldn6Q9Z262 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cldn6Q9Z262 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cldn6Q9Z262 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cldn6Q9Z262 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cldn6Q9Z262 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Cldn6Q9Z262 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cldn6Q9Z262 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.84■□□□□ 0.61
Cldn6Q9Z262 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.84■□□□□ 0.61
Cldn6Q9Z262 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
Cldn6Q9Z262 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cldn6Q9Z262 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cldn6Q9Z262 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Cldn6Q9Z262 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cldn6Q9Z262 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cldn6Q9Z262 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Cldn6Q9Z262 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Cldn6Q9Z262 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Cldn6Q9Z262 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.83■□□□□ 0.6
Cldn6Q9Z262 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
Cldn6Q9Z262 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Cldn6Q9Z262 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Cldn6Q9Z262 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cldn6Q9Z262 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cldn6Q9Z262 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cldn6Q9Z262 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Cldn6Q9Z262 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Cldn6Q9Z262 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn6Q9Z262 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn6Q9Z262 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn6Q9Z262 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn6Q9Z262 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn6Q9Z262 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn6Q9Z262 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn6Q9Z262 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.82■□□□□ 0.6
Cldn6Q9Z262 Gm43530-201ENSMUST00000195920 274 ntBASIC18.82■□□□□ 0.6
Cldn6Q9Z262 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn6Q9Z262 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn6Q9Z262 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Cldn6Q9Z262 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn6Q9Z262 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cldn6Q9Z262 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn6Q9Z262 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn6Q9Z262 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn6Q9Z262 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn6Q9Z262 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.81■□□□□ 0.6
Cldn6Q9Z262 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn6Q9Z262 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn6Q9Z262 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn6Q9Z262 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn6Q9Z262 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cldn6Q9Z262 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn6Q9Z262 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn6Q9Z262 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn6Q9Z262 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn6Q9Z262 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.8■□□□□ 0.6
Cldn6Q9Z262 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Cldn6Q9Z262 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Cldn6Q9Z262 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn6Q9Z262 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn6Q9Z262 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Cldn6Q9Z262 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn6Q9Z262 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn6Q9Z262 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn6Q9Z262 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.8■□□□□ 0.6
Cldn6Q9Z262 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn6Q9Z262 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cldn6Q9Z262 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn6Q9Z262 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cldn6Q9Z262 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.79■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms