Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.34■□□□□ 0.85
Cldn3Q9Z0G9 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Cldn3Q9Z0G9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cldn3Q9Z0G9 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cldn3Q9Z0G9 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cldn3Q9Z0G9 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cldn3Q9Z0G9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Cldn3Q9Z0G9 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cldn3Q9Z0G9 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.33■□□□□ 0.85
Cldn3Q9Z0G9 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cldn3Q9Z0G9 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cldn3Q9Z0G9 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.33■□□□□ 0.85
Cldn3Q9Z0G9 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cldn3Q9Z0G9 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cldn3Q9Z0G9 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Cldn3Q9Z0G9 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Cldn3Q9Z0G9 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cldn3Q9Z0G9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cldn3Q9Z0G9 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cldn3Q9Z0G9 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.32■□□□□ 0.84
Cldn3Q9Z0G9 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.32■□□□□ 0.84
Cldn3Q9Z0G9 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.32■□□□□ 0.84
Cldn3Q9Z0G9 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cldn3Q9Z0G9 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cldn3Q9Z0G9 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Cldn3Q9Z0G9 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cldn3Q9Z0G9 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cldn3Q9Z0G9 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cldn3Q9Z0G9 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cldn3Q9Z0G9 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Cldn3Q9Z0G9 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cldn3Q9Z0G9 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cldn3Q9Z0G9 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.31■□□□□ 0.84
Cldn3Q9Z0G9 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cldn3Q9Z0G9 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cldn3Q9Z0G9 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.31■□□□□ 0.84
Cldn3Q9Z0G9 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cldn3Q9Z0G9 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
Cldn3Q9Z0G9 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cldn3Q9Z0G9 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cldn3Q9Z0G9 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cldn3Q9Z0G9 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cldn3Q9Z0G9 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cldn3Q9Z0G9 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cldn3Q9Z0G9 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cldn3Q9Z0G9 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cldn3Q9Z0G9 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cldn3Q9Z0G9 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.3■□□□□ 0.84
Cldn3Q9Z0G9 Golgb1-201ENSMUST00000023534 498 ntBASIC20.3■□□□□ 0.84
Cldn3Q9Z0G9 Gm9847-201ENSMUST00000052528 599 ntBASIC20.3■□□□□ 0.84
Cldn3Q9Z0G9 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cldn3Q9Z0G9 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cldn3Q9Z0G9 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cldn3Q9Z0G9 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cldn3Q9Z0G9 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cldn3Q9Z0G9 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cldn3Q9Z0G9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cldn3Q9Z0G9 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Cldn3Q9Z0G9 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cldn3Q9Z0G9 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Cldn3Q9Z0G9 Notumos-201ENSMUST00000151998 2659 ntBASIC20.29■□□□□ 0.84
Cldn3Q9Z0G9 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.28■□□□□ 0.84
Cldn3Q9Z0G9 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cldn3Q9Z0G9 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cldn3Q9Z0G9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cldn3Q9Z0G9 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Cldn3Q9Z0G9 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Cldn3Q9Z0G9 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cldn3Q9Z0G9 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
Cldn3Q9Z0G9 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cldn3Q9Z0G9 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cldn3Q9Z0G9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.27■□□□□ 0.84
Cldn3Q9Z0G9 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cldn3Q9Z0G9 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cldn3Q9Z0G9 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cldn3Q9Z0G9 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cldn3Q9Z0G9 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cldn3Q9Z0G9 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cldn3Q9Z0G9 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cldn3Q9Z0G9 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cldn3Q9Z0G9 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cldn3Q9Z0G9 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cldn3Q9Z0G9 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn3Q9Z0G9 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn3Q9Z0G9 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn3Q9Z0G9 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Cldn3Q9Z0G9 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn3Q9Z0G9 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn3Q9Z0G9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cldn3Q9Z0G9 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Cldn3Q9Z0G9 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cldn3Q9Z0G9 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cldn3Q9Z0G9 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Cldn3Q9Z0G9 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cldn3Q9Z0G9 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cldn3Q9Z0G9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cldn3Q9Z0G9 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cldn3Q9Z0G9 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cldn3Q9Z0G9 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cldn3Q9Z0G9 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms