Protein–RNA interactions for Protein: Q9R1A8

Rfwd2, E3 ubiquitin-protein ligase RFWD2, mousemouse

Known RBP Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd2Q9R1A8 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.67■□□□□ 0.9
Rfwd2Q9R1A8 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rfwd2Q9R1A8 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.67■□□□□ 0.9
Rfwd2Q9R1A8 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.67■□□□□ 0.9
Rfwd2Q9R1A8 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rfwd2Q9R1A8 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.67■□□□□ 0.9
Rfwd2Q9R1A8 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rfwd2Q9R1A8 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rfwd2Q9R1A8 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.66■□□□□ 0.9
Rfwd2Q9R1A8 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.66■□□□□ 0.9
Rfwd2Q9R1A8 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Rfwd2Q9R1A8 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Rfwd2Q9R1A8 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rfwd2Q9R1A8 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.66■□□□□ 0.9
Rfwd2Q9R1A8 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Rfwd2Q9R1A8 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rfwd2Q9R1A8 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rfwd2Q9R1A8 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rfwd2Q9R1A8 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rfwd2Q9R1A8 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rfwd2Q9R1A8 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.65■□□□□ 0.9
Rfwd2Q9R1A8 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfwd2Q9R1A8 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfwd2Q9R1A8 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rfwd2Q9R1A8 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.64■□□□□ 0.9
Rfwd2Q9R1A8 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rfwd2Q9R1A8 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rfwd2Q9R1A8 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rfwd2Q9R1A8 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.64■□□□□ 0.89
Rfwd2Q9R1A8 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rfwd2Q9R1A8 Gm43566-201ENSMUST00000196851 808 ntBASIC20.64■□□□□ 0.89
Rfwd2Q9R1A8 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Rfwd2Q9R1A8 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rfwd2Q9R1A8 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rfwd2Q9R1A8 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rfwd2Q9R1A8 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rfwd2Q9R1A8 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rfwd2Q9R1A8 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rfwd2Q9R1A8 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Rfwd2Q9R1A8 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.63■□□□□ 0.89
Rfwd2Q9R1A8 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.63■□□□□ 0.89
Rfwd2Q9R1A8 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfwd2Q9R1A8 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rfwd2Q9R1A8 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfwd2Q9R1A8 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rfwd2Q9R1A8 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.62■□□□□ 0.89
Rfwd2Q9R1A8 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Rfwd2Q9R1A8 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rfwd2Q9R1A8 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfwd2Q9R1A8 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfwd2Q9R1A8 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rfwd2Q9R1A8 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfwd2Q9R1A8 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfwd2Q9R1A8 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfwd2Q9R1A8 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rfwd2Q9R1A8 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rfwd2Q9R1A8 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rfwd2Q9R1A8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rfwd2Q9R1A8 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.61■□□□□ 0.89
Rfwd2Q9R1A8 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rfwd2Q9R1A8 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rfwd2Q9R1A8 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.61■□□□□ 0.89
Rfwd2Q9R1A8 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Rfwd2Q9R1A8 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Rfwd2Q9R1A8 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rfwd2Q9R1A8 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rfwd2Q9R1A8 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.6■□□□□ 0.89
Rfwd2Q9R1A8 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Rfwd2Q9R1A8 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC20.6■□□□□ 0.89
Rfwd2Q9R1A8 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.6■□□□□ 0.89
Rfwd2Q9R1A8 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.6■□□□□ 0.89
Rfwd2Q9R1A8 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rfwd2Q9R1A8 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rfwd2Q9R1A8 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfwd2Q9R1A8 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Rfwd2Q9R1A8 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.59■□□□□ 0.89
Rfwd2Q9R1A8 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfwd2Q9R1A8 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.59■□□□□ 0.89
Rfwd2Q9R1A8 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfwd2Q9R1A8 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rfwd2Q9R1A8 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rfwd2Q9R1A8 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Rfwd2Q9R1A8 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rfwd2Q9R1A8 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rfwd2Q9R1A8 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Rfwd2Q9R1A8 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Rfwd2Q9R1A8 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
Rfwd2Q9R1A8 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Rfwd2Q9R1A8 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rfwd2Q9R1A8 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rfwd2Q9R1A8 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rfwd2Q9R1A8 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.57■□□□□ 0.88
Rfwd2Q9R1A8 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rfwd2Q9R1A8 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.57■□□□□ 0.88
Rfwd2Q9R1A8 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfwd2Q9R1A8 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfwd2Q9R1A8 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfwd2Q9R1A8 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfwd2Q9R1A8 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfwd2Q9R1A8 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms