Protein–RNA interactions for Protein: Q9R0X5

Rpgr, X-linked retinitis pigmentosa GTPase regulator, mousemouse

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpgrQ9R0X5 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC20.27■□□□□ 0.84
RpgrQ9R0X5 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RpgrQ9R0X5 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
RpgrQ9R0X5 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RpgrQ9R0X5 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
RpgrQ9R0X5 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RpgrQ9R0X5 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
RpgrQ9R0X5 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RpgrQ9R0X5 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RpgrQ9R0X5 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RpgrQ9R0X5 Gm9959-201ENSMUST00000068277 390 ntBASIC20.26■□□□□ 0.83
RpgrQ9R0X5 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RpgrQ9R0X5 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RpgrQ9R0X5 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RpgrQ9R0X5 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RpgrQ9R0X5 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RpgrQ9R0X5 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RpgrQ9R0X5 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RpgrQ9R0X5 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.25■□□□□ 0.83
RpgrQ9R0X5 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
RpgrQ9R0X5 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
RpgrQ9R0X5 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RpgrQ9R0X5 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RpgrQ9R0X5 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
RpgrQ9R0X5 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.24■□□□□ 0.83
RpgrQ9R0X5 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RpgrQ9R0X5 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RpgrQ9R0X5 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
RpgrQ9R0X5 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RpgrQ9R0X5 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
RpgrQ9R0X5 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
RpgrQ9R0X5 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RpgrQ9R0X5 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
RpgrQ9R0X5 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
RpgrQ9R0X5 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RpgrQ9R0X5 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RpgrQ9R0X5 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RpgrQ9R0X5 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.23■□□□□ 0.83
RpgrQ9R0X5 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RpgrQ9R0X5 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RpgrQ9R0X5 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.23■□□□□ 0.83
RpgrQ9R0X5 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RpgrQ9R0X5 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
RpgrQ9R0X5 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RpgrQ9R0X5 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
RpgrQ9R0X5 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
RpgrQ9R0X5 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.22■□□□□ 0.83
RpgrQ9R0X5 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.22■□□□□ 0.83
RpgrQ9R0X5 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RpgrQ9R0X5 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RpgrQ9R0X5 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RpgrQ9R0X5 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RpgrQ9R0X5 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
RpgrQ9R0X5 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
RpgrQ9R0X5 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
RpgrQ9R0X5 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RpgrQ9R0X5 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
RpgrQ9R0X5 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
RpgrQ9R0X5 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
RpgrQ9R0X5 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.21■□□□□ 0.83
RpgrQ9R0X5 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.21■□□□□ 0.83
RpgrQ9R0X5 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.21■□□□□ 0.83
RpgrQ9R0X5 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
RpgrQ9R0X5 Golph3-202ENSMUST00000226517 2359 ntBASIC20.21■□□□□ 0.83
RpgrQ9R0X5 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
RpgrQ9R0X5 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RpgrQ9R0X5 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
RpgrQ9R0X5 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.2■□□□□ 0.82
RpgrQ9R0X5 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RpgrQ9R0X5 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
RpgrQ9R0X5 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RpgrQ9R0X5 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
RpgrQ9R0X5 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
RpgrQ9R0X5 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC20.19■□□□□ 0.82
RpgrQ9R0X5 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.19■□□□□ 0.82
RpgrQ9R0X5 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RpgrQ9R0X5 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RpgrQ9R0X5 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RpgrQ9R0X5 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RpgrQ9R0X5 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RpgrQ9R0X5 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RpgrQ9R0X5 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RpgrQ9R0X5 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RpgrQ9R0X5 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.18■□□□□ 0.82
RpgrQ9R0X5 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RpgrQ9R0X5 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RpgrQ9R0X5 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RpgrQ9R0X5 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
RpgrQ9R0X5 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RpgrQ9R0X5 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RpgrQ9R0X5 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC20.17■□□□□ 0.82
RpgrQ9R0X5 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RpgrQ9R0X5 Gm14117-201ENSMUST00000122417 843 ntBASIC20.17■□□□□ 0.82
RpgrQ9R0X5 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.17■□□□□ 0.82
RpgrQ9R0X5 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.17■□□□□ 0.82
RpgrQ9R0X5 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RpgrQ9R0X5 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RpgrQ9R0X5 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RpgrQ9R0X5 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
RpgrQ9R0X5 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms