Protein–RNA interactions for Protein: Q9QXN0

Shroom3, Protein Shroom3, mousemouse

Predictions only

Length 1,986 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom3Q9QXN0 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Shroom3Q9QXN0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Shroom3Q9QXN0 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Shroom3Q9QXN0 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Shroom3Q9QXN0 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Shroom3Q9QXN0 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Shroom3Q9QXN0 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.25■□□□□ 0.83
Shroom3Q9QXN0 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.25■□□□□ 0.83
Shroom3Q9QXN0 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Shroom3Q9QXN0 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Shroom3Q9QXN0 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Shroom3Q9QXN0 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Shroom3Q9QXN0 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Shroom3Q9QXN0 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Shroom3Q9QXN0 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Shroom3Q9QXN0 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Shroom3Q9QXN0 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Shroom3Q9QXN0 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Shroom3Q9QXN0 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Shroom3Q9QXN0 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.24■□□□□ 0.83
Shroom3Q9QXN0 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
Shroom3Q9QXN0 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Shroom3Q9QXN0 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Shroom3Q9QXN0 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.24■□□□□ 0.83
Shroom3Q9QXN0 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.23■□□□□ 0.83
Shroom3Q9QXN0 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shroom3Q9QXN0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shroom3Q9QXN0 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Shroom3Q9QXN0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Shroom3Q9QXN0 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shroom3Q9QXN0 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Shroom3Q9QXN0 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Shroom3Q9QXN0 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shroom3Q9QXN0 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shroom3Q9QXN0 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shroom3Q9QXN0 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shroom3Q9QXN0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shroom3Q9QXN0 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Shroom3Q9QXN0 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Shroom3Q9QXN0 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.22■□□□□ 0.83
Shroom3Q9QXN0 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Shroom3Q9QXN0 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Shroom3Q9QXN0 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Shroom3Q9QXN0 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Shroom3Q9QXN0 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Shroom3Q9QXN0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
Shroom3Q9QXN0 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Shroom3Q9QXN0 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Shroom3Q9QXN0 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.21■□□□□ 0.83
Shroom3Q9QXN0 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shroom3Q9QXN0 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shroom3Q9QXN0 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shroom3Q9QXN0 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Shroom3Q9QXN0 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shroom3Q9QXN0 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Shroom3Q9QXN0 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Shroom3Q9QXN0 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.21■□□□□ 0.83
Shroom3Q9QXN0 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Shroom3Q9QXN0 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Shroom3Q9QXN0 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
Shroom3Q9QXN0 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Shroom3Q9QXN0 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Shroom3Q9QXN0 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
Shroom3Q9QXN0 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Shroom3Q9QXN0 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Shroom3Q9QXN0 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Shroom3Q9QXN0 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Shroom3Q9QXN0 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Shroom3Q9QXN0 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Shroom3Q9QXN0 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Shroom3Q9QXN0 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Shroom3Q9QXN0 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Shroom3Q9QXN0 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Shroom3Q9QXN0 Gm43137-201ENSMUST00000198052 594 ntBASIC20.19■□□□□ 0.82
Shroom3Q9QXN0 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Shroom3Q9QXN0 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Shroom3Q9QXN0 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Shroom3Q9QXN0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.18■□□□□ 0.82
Shroom3Q9QXN0 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Shroom3Q9QXN0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Shroom3Q9QXN0 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Shroom3Q9QXN0 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Shroom3Q9QXN0 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Shroom3Q9QXN0 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Shroom3Q9QXN0 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Shroom3Q9QXN0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Shroom3Q9QXN0 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Shroom3Q9QXN0 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Shroom3Q9QXN0 Gm6139-201ENSMUST00000079261 882 ntBASIC20.17■□□□□ 0.82
Shroom3Q9QXN0 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Shroom3Q9QXN0 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Shroom3Q9QXN0 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.17■□□□□ 0.82
Shroom3Q9QXN0 Gm9870-201ENSMUST00000063874 645 ntBASIC20.17■□□□□ 0.82
Shroom3Q9QXN0 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Shroom3Q9QXN0 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Shroom3Q9QXN0 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Shroom3Q9QXN0 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Shroom3Q9QXN0 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC20.16■□□□□ 0.82
Shroom3Q9QXN0 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Shroom3Q9QXN0 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 664 ms