Protein–RNA interactions for Protein: Q9QX15

Clca3a1, Calcium-activated chloride channel regulator 3A-1, mousemouse

Predictions only

Length 902 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3a1Q9QX15 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Clca3a1Q9QX15 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.91■□□□□ 0.62
Clca3a1Q9QX15 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clca3a1Q9QX15 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Clca3a1Q9QX15 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Clca3a1Q9QX15 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clca3a1Q9QX15 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clca3a1Q9QX15 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Clca3a1Q9QX15 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Clca3a1Q9QX15 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Clca3a1Q9QX15 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Clca3a1Q9QX15 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clca3a1Q9QX15 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clca3a1Q9QX15 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clca3a1Q9QX15 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clca3a1Q9QX15 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.89■□□□□ 0.61
Clca3a1Q9QX15 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Clca3a1Q9QX15 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clca3a1Q9QX15 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clca3a1Q9QX15 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.89■□□□□ 0.61
Clca3a1Q9QX15 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.89■□□□□ 0.61
Clca3a1Q9QX15 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clca3a1Q9QX15 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Clca3a1Q9QX15 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clca3a1Q9QX15 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clca3a1Q9QX15 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clca3a1Q9QX15 Gm7417-201ENSMUST00000192950 473 ntBASIC18.88■□□□□ 0.61
Clca3a1Q9QX15 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.88■□□□□ 0.61
Clca3a1Q9QX15 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.88■□□□□ 0.61
Clca3a1Q9QX15 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Clca3a1Q9QX15 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clca3a1Q9QX15 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Clca3a1Q9QX15 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Clca3a1Q9QX15 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clca3a1Q9QX15 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clca3a1Q9QX15 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clca3a1Q9QX15 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clca3a1Q9QX15 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Clca3a1Q9QX15 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clca3a1Q9QX15 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Clca3a1Q9QX15 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clca3a1Q9QX15 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clca3a1Q9QX15 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Clca3a1Q9QX15 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Clca3a1Q9QX15 AC122428.2-201ENSMUST00000216321 1832 ntBASIC18.86■□□□□ 0.61
Clca3a1Q9QX15 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clca3a1Q9QX15 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clca3a1Q9QX15 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Clca3a1Q9QX15 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clca3a1Q9QX15 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clca3a1Q9QX15 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Clca3a1Q9QX15 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clca3a1Q9QX15 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC18.86■□□□□ 0.61
Clca3a1Q9QX15 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
Clca3a1Q9QX15 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Clca3a1Q9QX15 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clca3a1Q9QX15 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Clca3a1Q9QX15 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clca3a1Q9QX15 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clca3a1Q9QX15 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Clca3a1Q9QX15 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clca3a1Q9QX15 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Clca3a1Q9QX15 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Clca3a1Q9QX15 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.85■□□□□ 0.61
Clca3a1Q9QX15 Gm7143-201ENSMUST00000222811 859 ntBASIC18.85■□□□□ 0.61
Clca3a1Q9QX15 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Clca3a1Q9QX15 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC18.85■□□□□ 0.61
Clca3a1Q9QX15 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Clca3a1Q9QX15 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.84■□□□□ 0.61
Clca3a1Q9QX15 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Clca3a1Q9QX15 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clca3a1Q9QX15 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Clca3a1Q9QX15 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clca3a1Q9QX15 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clca3a1Q9QX15 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC18.84■□□□□ 0.61
Clca3a1Q9QX15 Etf1-202ENSMUST00000180351 108 ntBASIC18.84■□□□□ 0.61
Clca3a1Q9QX15 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC18.84■□□□□ 0.61
Clca3a1Q9QX15 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
Clca3a1Q9QX15 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Clca3a1Q9QX15 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clca3a1Q9QX15 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clca3a1Q9QX15 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.84■□□□□ 0.61
Clca3a1Q9QX15 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Clca3a1Q9QX15 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Clca3a1Q9QX15 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Clca3a1Q9QX15 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clca3a1Q9QX15 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clca3a1Q9QX15 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clca3a1Q9QX15 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Clca3a1Q9QX15 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Clca3a1Q9QX15 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Clca3a1Q9QX15 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Clca3a1Q9QX15 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clca3a1Q9QX15 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.83■□□□□ 0.6
Clca3a1Q9QX15 Gm9959-201ENSMUST00000068277 390 ntBASIC18.83■□□□□ 0.6
Clca3a1Q9QX15 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clca3a1Q9QX15 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Clca3a1Q9QX15 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clca3a1Q9QX15 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Clca3a1Q9QX15 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms