Protein–RNA interactions for Protein: Q9EQU3

Tlr9, Toll-like receptor 9, mousemouse

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr9Q9EQU3 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Tlr9Q9EQU3 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Tlr9Q9EQU3 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Tlr9Q9EQU3 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.98■□□□□ 0.95
Tlr9Q9EQU3 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tlr9Q9EQU3 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tlr9Q9EQU3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Tlr9Q9EQU3 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tlr9Q9EQU3 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.97■□□□□ 0.95
Tlr9Q9EQU3 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Tlr9Q9EQU3 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tlr9Q9EQU3 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.97■□□□□ 0.95
Tlr9Q9EQU3 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tlr9Q9EQU3 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Tlr9Q9EQU3 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tlr9Q9EQU3 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tlr9Q9EQU3 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.97■□□□□ 0.95
Tlr9Q9EQU3 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Tlr9Q9EQU3 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Tlr9Q9EQU3 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tlr9Q9EQU3 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Tlr9Q9EQU3 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Tlr9Q9EQU3 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tlr9Q9EQU3 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tlr9Q9EQU3 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tlr9Q9EQU3 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.96■□□□□ 0.95
Tlr9Q9EQU3 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Tlr9Q9EQU3 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Tlr9Q9EQU3 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tlr9Q9EQU3 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tlr9Q9EQU3 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
Tlr9Q9EQU3 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tlr9Q9EQU3 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tlr9Q9EQU3 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tlr9Q9EQU3 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.95■□□□□ 0.94
Tlr9Q9EQU3 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Tlr9Q9EQU3 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
Tlr9Q9EQU3 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.94■□□□□ 0.94
Tlr9Q9EQU3 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Tlr9Q9EQU3 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.94■□□□□ 0.94
Tlr9Q9EQU3 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Tlr9Q9EQU3 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tlr9Q9EQU3 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tlr9Q9EQU3 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tlr9Q9EQU3 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Tlr9Q9EQU3 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tlr9Q9EQU3 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Tlr9Q9EQU3 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tlr9Q9EQU3 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tlr9Q9EQU3 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Tlr9Q9EQU3 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.94■□□□□ 0.94
Tlr9Q9EQU3 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tlr9Q9EQU3 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Tlr9Q9EQU3 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tlr9Q9EQU3 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Tlr9Q9EQU3 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
Tlr9Q9EQU3 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tlr9Q9EQU3 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Tlr9Q9EQU3 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Tlr9Q9EQU3 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tlr9Q9EQU3 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tlr9Q9EQU3 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tlr9Q9EQU3 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.92■□□□□ 0.94
Tlr9Q9EQU3 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tlr9Q9EQU3 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tlr9Q9EQU3 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tlr9Q9EQU3 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tlr9Q9EQU3 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Tlr9Q9EQU3 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tlr9Q9EQU3 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tlr9Q9EQU3 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC20.91■□□□□ 0.94
Tlr9Q9EQU3 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tlr9Q9EQU3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.91■□□□□ 0.94
Tlr9Q9EQU3 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.91■□□□□ 0.94
Tlr9Q9EQU3 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tlr9Q9EQU3 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tlr9Q9EQU3 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC20.91■□□□□ 0.94
Tlr9Q9EQU3 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tlr9Q9EQU3 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Tlr9Q9EQU3 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.91■□□□□ 0.94
Tlr9Q9EQU3 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Tlr9Q9EQU3 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tlr9Q9EQU3 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tlr9Q9EQU3 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tlr9Q9EQU3 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tlr9Q9EQU3 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Tlr9Q9EQU3 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.9■□□□□ 0.94
Tlr9Q9EQU3 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.9■□□□□ 0.94
Tlr9Q9EQU3 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC20.9■□□□□ 0.94
Tlr9Q9EQU3 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tlr9Q9EQU3 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.9■□□□□ 0.94
Tlr9Q9EQU3 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.9■□□□□ 0.94
Tlr9Q9EQU3 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Tlr9Q9EQU3 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Tlr9Q9EQU3 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Tlr9Q9EQU3 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tlr9Q9EQU3 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.89■□□□□ 0.93
Tlr9Q9EQU3 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.89■□□□□ 0.93
Tlr9Q9EQU3 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Tlr9Q9EQU3 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms