Protein–RNA interactions for Protein: Q9EQ80

Nif3l1, NIF3-like protein 1, mousemouse

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nif3l1Q9EQ80 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20■□□□□ 0.79
Nif3l1Q9EQ80 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nif3l1Q9EQ80 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Nif3l1Q9EQ80 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Nif3l1Q9EQ80 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20■□□□□ 0.79
Nif3l1Q9EQ80 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nif3l1Q9EQ80 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nif3l1Q9EQ80 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nif3l1Q9EQ80 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Nif3l1Q9EQ80 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nif3l1Q9EQ80 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Nif3l1Q9EQ80 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nif3l1Q9EQ80 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.99■□□□□ 0.79
Nif3l1Q9EQ80 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nif3l1Q9EQ80 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Nif3l1Q9EQ80 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nif3l1Q9EQ80 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Nif3l1Q9EQ80 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nif3l1Q9EQ80 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Nif3l1Q9EQ80 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Nif3l1Q9EQ80 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nif3l1Q9EQ80 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.98■□□□□ 0.79
Nif3l1Q9EQ80 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Nif3l1Q9EQ80 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nif3l1Q9EQ80 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.98■□□□□ 0.79
Nif3l1Q9EQ80 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.98■□□□□ 0.79
Nif3l1Q9EQ80 Golgb1-201ENSMUST00000023534 498 ntBASIC19.98■□□□□ 0.79
Nif3l1Q9EQ80 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nif3l1Q9EQ80 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nif3l1Q9EQ80 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nif3l1Q9EQ80 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nif3l1Q9EQ80 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Nif3l1Q9EQ80 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Nif3l1Q9EQ80 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nif3l1Q9EQ80 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nif3l1Q9EQ80 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nif3l1Q9EQ80 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Nif3l1Q9EQ80 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nif3l1Q9EQ80 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nif3l1Q9EQ80 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.97■□□□□ 0.79
Nif3l1Q9EQ80 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nif3l1Q9EQ80 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
Nif3l1Q9EQ80 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Nif3l1Q9EQ80 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Nif3l1Q9EQ80 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Nif3l1Q9EQ80 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nif3l1Q9EQ80 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nif3l1Q9EQ80 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nif3l1Q9EQ80 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nif3l1Q9EQ80 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nif3l1Q9EQ80 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nif3l1Q9EQ80 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Nif3l1Q9EQ80 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Nif3l1Q9EQ80 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nif3l1Q9EQ80 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nif3l1Q9EQ80 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nif3l1Q9EQ80 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Nif3l1Q9EQ80 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nif3l1Q9EQ80 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nif3l1Q9EQ80 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Nif3l1Q9EQ80 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nif3l1Q9EQ80 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Nif3l1Q9EQ80 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Nif3l1Q9EQ80 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nif3l1Q9EQ80 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nif3l1Q9EQ80 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Nif3l1Q9EQ80 Gm9847-201ENSMUST00000052528 599 ntBASIC19.94■□□□□ 0.78
Nif3l1Q9EQ80 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nif3l1Q9EQ80 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.94■□□□□ 0.78
Nif3l1Q9EQ80 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nif3l1Q9EQ80 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nif3l1Q9EQ80 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Nif3l1Q9EQ80 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Nif3l1Q9EQ80 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Nif3l1Q9EQ80 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.93■□□□□ 0.78
Nif3l1Q9EQ80 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.93■□□□□ 0.78
Nif3l1Q9EQ80 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Nif3l1Q9EQ80 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
Nif3l1Q9EQ80 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.93■□□□□ 0.78
Nif3l1Q9EQ80 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nif3l1Q9EQ80 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Nif3l1Q9EQ80 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Nif3l1Q9EQ80 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Nif3l1Q9EQ80 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nif3l1Q9EQ80 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.92■□□□□ 0.78
Nif3l1Q9EQ80 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Nif3l1Q9EQ80 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nif3l1Q9EQ80 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.91■□□□□ 0.78
Nif3l1Q9EQ80 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nif3l1Q9EQ80 Mir6236-201ENSMUST00000184437 123 ntBASIC19.91■□□□□ 0.78
Nif3l1Q9EQ80 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Nif3l1Q9EQ80 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nif3l1Q9EQ80 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nif3l1Q9EQ80 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Nif3l1Q9EQ80 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Nif3l1Q9EQ80 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Nif3l1Q9EQ80 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Nif3l1Q9EQ80 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
Nif3l1Q9EQ80 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.9■□□□□ 0.78
Nif3l1Q9EQ80 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.9■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms