Protein–RNA interactions for Protein: Q9DCB1

Hmgn3, High mobility group nucleosome-binding domain-containing protein 3, mousemouse

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn3Q9DCB1 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Hmgn3Q9DCB1 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hmgn3Q9DCB1 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hmgn3Q9DCB1 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hmgn3Q9DCB1 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Hmgn3Q9DCB1 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Hmgn3Q9DCB1 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
Hmgn3Q9DCB1 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Hmgn3Q9DCB1 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
Hmgn3Q9DCB1 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hmgn3Q9DCB1 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hmgn3Q9DCB1 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hmgn3Q9DCB1 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Hmgn3Q9DCB1 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Hmgn3Q9DCB1 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Hmgn3Q9DCB1 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC18.86■□□□□ 0.61
Hmgn3Q9DCB1 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.85■□□□□ 0.61
Hmgn3Q9DCB1 Golph3-205ENSMUST00000228671 2842 ntBASIC18.85■□□□□ 0.61
Hmgn3Q9DCB1 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Hmgn3Q9DCB1 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hmgn3Q9DCB1 Scarna2-201ENSMUST00000157560 414 ntBASIC18.85■□□□□ 0.61
Hmgn3Q9DCB1 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Hmgn3Q9DCB1 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC18.85■□□□□ 0.61
Hmgn3Q9DCB1 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hmgn3Q9DCB1 Gm9806-201ENSMUST00000051080 552 ntBASIC18.85■□□□□ 0.61
Hmgn3Q9DCB1 Gm5784-201ENSMUST00000179344 2478 ntBASIC18.85■□□□□ 0.61
Hmgn3Q9DCB1 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Hmgn3Q9DCB1 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmgn3Q9DCB1 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmgn3Q9DCB1 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.84■□□□□ 0.61
Hmgn3Q9DCB1 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Hmgn3Q9DCB1 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Hmgn3Q9DCB1 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hmgn3Q9DCB1 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hmgn3Q9DCB1 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Hmgn3Q9DCB1 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
Hmgn3Q9DCB1 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Hmgn3Q9DCB1 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hmgn3Q9DCB1 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Hmgn3Q9DCB1 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hmgn3Q9DCB1 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hmgn3Q9DCB1 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Hmgn3Q9DCB1 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmgn3Q9DCB1 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.82■□□□□ 0.6
Hmgn3Q9DCB1 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Hmgn3Q9DCB1 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmgn3Q9DCB1 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmgn3Q9DCB1 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmgn3Q9DCB1 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Hmgn3Q9DCB1 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmgn3Q9DCB1 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.81■□□□□ 0.6
Hmgn3Q9DCB1 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmgn3Q9DCB1 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmgn3Q9DCB1 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Hmgn3Q9DCB1 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Hmgn3Q9DCB1 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Hmgn3Q9DCB1 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
Hmgn3Q9DCB1 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmgn3Q9DCB1 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmgn3Q9DCB1 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmgn3Q9DCB1 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Hmgn3Q9DCB1 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18.8■□□□□ 0.6
Hmgn3Q9DCB1 Gm16437-201ENSMUST00000025669 507 ntBASIC18.8■□□□□ 0.6
Hmgn3Q9DCB1 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmgn3Q9DCB1 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmgn3Q9DCB1 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Hmgn3Q9DCB1 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmgn3Q9DCB1 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Hmgn3Q9DCB1 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmgn3Q9DCB1 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmgn3Q9DCB1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmgn3Q9DCB1 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
Hmgn3Q9DCB1 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmgn3Q9DCB1 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmgn3Q9DCB1 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmgn3Q9DCB1 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Hmgn3Q9DCB1 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hmgn3Q9DCB1 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Hmgn3Q9DCB1 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Hmgn3Q9DCB1 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmgn3Q9DCB1 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Hmgn3Q9DCB1 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.78■□□□□ 0.6
Hmgn3Q9DCB1 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hmgn3Q9DCB1 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hmgn3Q9DCB1 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hmgn3Q9DCB1 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hmgn3Q9DCB1 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hmgn3Q9DCB1 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hmgn3Q9DCB1 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hmgn3Q9DCB1 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hmgn3Q9DCB1 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hmgn3Q9DCB1 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Hmgn3Q9DCB1 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hmgn3Q9DCB1 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Hmgn3Q9DCB1 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hmgn3Q9DCB1 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hmgn3Q9DCB1 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hmgn3Q9DCB1 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.77■□□□□ 0.6
Hmgn3Q9DCB1 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hmgn3Q9DCB1 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms