Protein–RNA interactions for Protein: Q9DBN9

Ddx59, Probable ATP-dependent RNA helicase DDX59, mousemouse

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx59Q9DBN9 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ddx59Q9DBN9 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.96■□□□□ 0.79
Ddx59Q9DBN9 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Ddx59Q9DBN9 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx59Q9DBN9 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Ddx59Q9DBN9 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Ddx59Q9DBN9 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx59Q9DBN9 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Ddx59Q9DBN9 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx59Q9DBN9 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx59Q9DBN9 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx59Q9DBN9 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ddx59Q9DBN9 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Ddx59Q9DBN9 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Ddx59Q9DBN9 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.94■□□□□ 0.78
Ddx59Q9DBN9 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.94■□□□□ 0.78
Ddx59Q9DBN9 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx59Q9DBN9 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx59Q9DBN9 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx59Q9DBN9 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ddx59Q9DBN9 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Ddx59Q9DBN9 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx59Q9DBN9 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.93■□□□□ 0.78
Ddx59Q9DBN9 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.93■□□□□ 0.78
Ddx59Q9DBN9 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC19.93■□□□□ 0.78
Ddx59Q9DBN9 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx59Q9DBN9 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx59Q9DBN9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx59Q9DBN9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx59Q9DBN9 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ddx59Q9DBN9 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx59Q9DBN9 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx59Q9DBN9 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx59Q9DBN9 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx59Q9DBN9 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.92■□□□□ 0.78
Ddx59Q9DBN9 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx59Q9DBN9 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx59Q9DBN9 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx59Q9DBN9 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx59Q9DBN9 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ddx59Q9DBN9 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx59Q9DBN9 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx59Q9DBN9 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx59Q9DBN9 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx59Q9DBN9 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.91■□□□□ 0.78
Ddx59Q9DBN9 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx59Q9DBN9 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx59Q9DBN9 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx59Q9DBN9 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ddx59Q9DBN9 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx59Q9DBN9 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx59Q9DBN9 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx59Q9DBN9 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Ddx59Q9DBN9 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx59Q9DBN9 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
Ddx59Q9DBN9 Gm22238-201ENSMUST00000175222 88 ntBASIC19.9■□□□□ 0.78
Ddx59Q9DBN9 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx59Q9DBN9 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx59Q9DBN9 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx59Q9DBN9 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.9■□□□□ 0.78
Ddx59Q9DBN9 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx59Q9DBN9 Golph3-202ENSMUST00000226517 2359 ntBASIC19.9■□□□□ 0.78
Ddx59Q9DBN9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ddx59Q9DBN9 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Ddx59Q9DBN9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx59Q9DBN9 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx59Q9DBN9 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
Ddx59Q9DBN9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx59Q9DBN9 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ddx59Q9DBN9 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx59Q9DBN9 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx59Q9DBN9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Ddx59Q9DBN9 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.88■□□□□ 0.77
Ddx59Q9DBN9 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx59Q9DBN9 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx59Q9DBN9 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx59Q9DBN9 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Ddx59Q9DBN9 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx59Q9DBN9 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Ddx59Q9DBN9 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ddx59Q9DBN9 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx59Q9DBN9 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.87■□□□□ 0.77
Ddx59Q9DBN9 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Ddx59Q9DBN9 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.87■□□□□ 0.77
Ddx59Q9DBN9 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Ddx59Q9DBN9 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.87■□□□□ 0.77
Ddx59Q9DBN9 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.86■□□□□ 0.77
Ddx59Q9DBN9 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx59Q9DBN9 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx59Q9DBN9 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx59Q9DBN9 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Ddx59Q9DBN9 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Ddx59Q9DBN9 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx59Q9DBN9 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx59Q9DBN9 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Ddx59Q9DBN9 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Ddx59Q9DBN9 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.85■□□□□ 0.77
Ddx59Q9DBN9 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx59Q9DBN9 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Ddx59Q9DBN9 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms