Protein–RNA interactions for Protein: Q9D361

Snrnp48, U11/U12 small nuclear ribonucleoprotein 48 kDa protein, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp48Q9D361 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Snrnp48Q9D361 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Snrnp48Q9D361 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Snrnp48Q9D361 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Snrnp48Q9D361 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Snrnp48Q9D361 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Snrnp48Q9D361 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Snrnp48Q9D361 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Snrnp48Q9D361 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.08■□□□□ 0.81
Snrnp48Q9D361 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Snrnp48Q9D361 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Snrnp48Q9D361 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.08■□□□□ 0.8
Snrnp48Q9D361 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Snrnp48Q9D361 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
Snrnp48Q9D361 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Snrnp48Q9D361 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Snrnp48Q9D361 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Snrnp48Q9D361 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Snrnp48Q9D361 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Snrnp48Q9D361 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Snrnp48Q9D361 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Snrnp48Q9D361 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.07■□□□□ 0.8
Snrnp48Q9D361 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.07■□□□□ 0.8
Snrnp48Q9D361 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Snrnp48Q9D361 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Snrnp48Q9D361 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Snrnp48Q9D361 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.07■□□□□ 0.8
Snrnp48Q9D361 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.07■□□□□ 0.8
Snrnp48Q9D361 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Snrnp48Q9D361 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Snrnp48Q9D361 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Snrnp48Q9D361 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Snrnp48Q9D361 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Snrnp48Q9D361 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Snrnp48Q9D361 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Snrnp48Q9D361 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Snrnp48Q9D361 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Snrnp48Q9D361 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Snrnp48Q9D361 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Snrnp48Q9D361 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Snrnp48Q9D361 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.05■□□□□ 0.8
Snrnp48Q9D361 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Snrnp48Q9D361 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Snrnp48Q9D361 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Snrnp48Q9D361 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Snrnp48Q9D361 Golgb1-201ENSMUST00000023534 498 ntBASIC20.05■□□□□ 0.8
Snrnp48Q9D361 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Snrnp48Q9D361 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Snrnp48Q9D361 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Snrnp48Q9D361 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Snrnp48Q9D361 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Snrnp48Q9D361 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.04■□□□□ 0.8
Snrnp48Q9D361 Mir6236-201ENSMUST00000184437 123 ntBASIC20.04■□□□□ 0.8
Snrnp48Q9D361 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Snrnp48Q9D361 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Snrnp48Q9D361 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Snrnp48Q9D361 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Snrnp48Q9D361 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Snrnp48Q9D361 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Snrnp48Q9D361 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Snrnp48Q9D361 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Snrnp48Q9D361 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.03■□□□□ 0.8
Snrnp48Q9D361 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Snrnp48Q9D361 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Snrnp48Q9D361 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Snrnp48Q9D361 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Snrnp48Q9D361 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Snrnp48Q9D361 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Snrnp48Q9D361 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Snrnp48Q9D361 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Snrnp48Q9D361 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Snrnp48Q9D361 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Snrnp48Q9D361 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Snrnp48Q9D361 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.02■□□□□ 0.8
Snrnp48Q9D361 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.02■□□□□ 0.8
Snrnp48Q9D361 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Snrnp48Q9D361 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Snrnp48Q9D361 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Snrnp48Q9D361 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Snrnp48Q9D361 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Snrnp48Q9D361 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Snrnp48Q9D361 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Snrnp48Q9D361 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Snrnp48Q9D361 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Snrnp48Q9D361 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Snrnp48Q9D361 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.01■□□□□ 0.79
Snrnp48Q9D361 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.01■□□□□ 0.79
Snrnp48Q9D361 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Snrnp48Q9D361 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.01■□□□□ 0.79
Snrnp48Q9D361 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Snrnp48Q9D361 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Snrnp48Q9D361 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Snrnp48Q9D361 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.01■□□□□ 0.79
Snrnp48Q9D361 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Snrnp48Q9D361 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20■□□□□ 0.79
Snrnp48Q9D361 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20■□□□□ 0.79
Snrnp48Q9D361 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Snrnp48Q9D361 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20■□□□□ 0.79
Snrnp48Q9D361 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Snrnp48Q9D361 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms