Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Snf8Q9CZ28 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Snf8Q9CZ28 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Snf8Q9CZ28 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.71■□□□□ 0.91
Snf8Q9CZ28 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Snf8Q9CZ28 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Snf8Q9CZ28 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
Snf8Q9CZ28 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Snf8Q9CZ28 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Snf8Q9CZ28 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Snf8Q9CZ28 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.7■□□□□ 0.9
Snf8Q9CZ28 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Snf8Q9CZ28 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Snf8Q9CZ28 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Snf8Q9CZ28 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Snf8Q9CZ28 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.7■□□□□ 0.9
Snf8Q9CZ28 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Snf8Q9CZ28 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Snf8Q9CZ28 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Snf8Q9CZ28 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Snf8Q9CZ28 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Snf8Q9CZ28 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Snf8Q9CZ28 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Snf8Q9CZ28 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Snf8Q9CZ28 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Snf8Q9CZ28 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Snf8Q9CZ28 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Snf8Q9CZ28 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Snf8Q9CZ28 Gm45444-201ENSMUST00000211394 898 ntBASIC20.68■□□□□ 0.9
Snf8Q9CZ28 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Snf8Q9CZ28 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Snf8Q9CZ28 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Snf8Q9CZ28 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.68■□□□□ 0.9
Snf8Q9CZ28 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Snf8Q9CZ28 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Snf8Q9CZ28 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Snf8Q9CZ28 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Snf8Q9CZ28 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.67■□□□□ 0.9
Snf8Q9CZ28 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Snf8Q9CZ28 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Snf8Q9CZ28 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Snf8Q9CZ28 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Snf8Q9CZ28 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.66■□□□□ 0.9
Snf8Q9CZ28 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snf8Q9CZ28 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Snf8Q9CZ28 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snf8Q9CZ28 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snf8Q9CZ28 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
Snf8Q9CZ28 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snf8Q9CZ28 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snf8Q9CZ28 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.66■□□□□ 0.9
Snf8Q9CZ28 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Snf8Q9CZ28 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Snf8Q9CZ28 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Snf8Q9CZ28 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Snf8Q9CZ28 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.65■□□□□ 0.9
Snf8Q9CZ28 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Snf8Q9CZ28 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Snf8Q9CZ28 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Snf8Q9CZ28 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.65■□□□□ 0.9
Snf8Q9CZ28 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.65■□□□□ 0.9
Snf8Q9CZ28 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Snf8Q9CZ28 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Snf8Q9CZ28 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Snf8Q9CZ28 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Snf8Q9CZ28 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Snf8Q9CZ28 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Snf8Q9CZ28 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Snf8Q9CZ28 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.64■□□□□ 0.89
Snf8Q9CZ28 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Snf8Q9CZ28 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Snf8Q9CZ28 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.64■□□□□ 0.89
Snf8Q9CZ28 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Snf8Q9CZ28 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Snf8Q9CZ28 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Snf8Q9CZ28 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Snf8Q9CZ28 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snf8Q9CZ28 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snf8Q9CZ28 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Snf8Q9CZ28 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.63■□□□□ 0.89
Snf8Q9CZ28 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Snf8Q9CZ28 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.63■□□□□ 0.89
Snf8Q9CZ28 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snf8Q9CZ28 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snf8Q9CZ28 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snf8Q9CZ28 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Snf8Q9CZ28 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snf8Q9CZ28 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Snf8Q9CZ28 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snf8Q9CZ28 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snf8Q9CZ28 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Snf8Q9CZ28 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snf8Q9CZ28 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snf8Q9CZ28 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snf8Q9CZ28 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Snf8Q9CZ28 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snf8Q9CZ28 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Snf8Q9CZ28 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.62■□□□□ 0.89
Snf8Q9CZ28 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Snf8Q9CZ28 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms