Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Chd1lQ9CXF7 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC22.74■■□□□ 1.23
Chd1lQ9CXF7 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC22.73■■□□□ 1.23
Chd1lQ9CXF7 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Chd1lQ9CXF7 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Chd1lQ9CXF7 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Chd1lQ9CXF7 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Chd1lQ9CXF7 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Chd1lQ9CXF7 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC22.72■■□□□ 1.23
Chd1lQ9CXF7 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
Chd1lQ9CXF7 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC22.72■■□□□ 1.23
Chd1lQ9CXF7 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Chd1lQ9CXF7 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Chd1lQ9CXF7 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC22.72■■□□□ 1.23
Chd1lQ9CXF7 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Chd1lQ9CXF7 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Chd1lQ9CXF7 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Chd1lQ9CXF7 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Chd1lQ9CXF7 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
Chd1lQ9CXF7 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC22.71■■□□□ 1.23
Chd1lQ9CXF7 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC22.71■■□□□ 1.23
Chd1lQ9CXF7 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC22.71■■□□□ 1.23
Chd1lQ9CXF7 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Chd1lQ9CXF7 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC22.71■■□□□ 1.23
Chd1lQ9CXF7 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
Chd1lQ9CXF7 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC22.7■■□□□ 1.23
Chd1lQ9CXF7 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC22.7■■□□□ 1.23
Chd1lQ9CXF7 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.7■■□□□ 1.22
Chd1lQ9CXF7 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Chd1lQ9CXF7 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Chd1lQ9CXF7 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Chd1lQ9CXF7 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC22.7■■□□□ 1.22
Chd1lQ9CXF7 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC22.7■■□□□ 1.22
Chd1lQ9CXF7 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Chd1lQ9CXF7 Gm43909-201ENSMUST00000203443 1876 ntBASIC22.7■■□□□ 1.22
Chd1lQ9CXF7 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
Chd1lQ9CXF7 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.22
Chd1lQ9CXF7 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Chd1lQ9CXF7 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Chd1lQ9CXF7 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC22.69■■□□□ 1.22
Chd1lQ9CXF7 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Chd1lQ9CXF7 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Chd1lQ9CXF7 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Chd1lQ9CXF7 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Chd1lQ9CXF7 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Chd1lQ9CXF7 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC22.68■■□□□ 1.22
Chd1lQ9CXF7 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC22.68■■□□□ 1.22
Chd1lQ9CXF7 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Chd1lQ9CXF7 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Chd1lQ9CXF7 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
Chd1lQ9CXF7 Gm11847-201ENSMUST00000125165 1119 ntBASIC22.68■■□□□ 1.22
Chd1lQ9CXF7 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC22.68■■□□□ 1.22
Chd1lQ9CXF7 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Chd1lQ9CXF7 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC22.68■■□□□ 1.22
Chd1lQ9CXF7 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Chd1lQ9CXF7 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Chd1lQ9CXF7 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Chd1lQ9CXF7 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Chd1lQ9CXF7 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Chd1lQ9CXF7 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Chd1lQ9CXF7 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Chd1lQ9CXF7 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Chd1lQ9CXF7 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Chd1lQ9CXF7 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Chd1lQ9CXF7 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Chd1lQ9CXF7 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Chd1lQ9CXF7 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC22.66■■□□□ 1.22
Chd1lQ9CXF7 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Chd1lQ9CXF7 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Chd1lQ9CXF7 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Chd1lQ9CXF7 Gm43592-201ENSMUST00000196922 1165 ntBASIC22.66■■□□□ 1.22
Chd1lQ9CXF7 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC22.66■■□□□ 1.22
Chd1lQ9CXF7 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC22.66■■□□□ 1.22
Chd1lQ9CXF7 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Chd1lQ9CXF7 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Chd1lQ9CXF7 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Chd1lQ9CXF7 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Chd1lQ9CXF7 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
Chd1lQ9CXF7 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC22.65■■□□□ 1.22
Chd1lQ9CXF7 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.21
Chd1lQ9CXF7 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Chd1lQ9CXF7 Gm14523-201ENSMUST00000117260 558 ntBASIC22.64■■□□□ 1.21
Chd1lQ9CXF7 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Chd1lQ9CXF7 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Chd1lQ9CXF7 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Chd1lQ9CXF7 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Chd1lQ9CXF7 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC22.64■■□□□ 1.21
Chd1lQ9CXF7 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Chd1lQ9CXF7 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
Chd1lQ9CXF7 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Chd1lQ9CXF7 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Chd1lQ9CXF7 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Chd1lQ9CXF7 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
Chd1lQ9CXF7 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Chd1lQ9CXF7 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Chd1lQ9CXF7 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC22.63■■□□□ 1.21
Chd1lQ9CXF7 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
Chd1lQ9CXF7 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Chd1lQ9CXF7 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC22.62■■□□□ 1.21
Chd1lQ9CXF7 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms