Protein–RNA interactions for Protein: Q9CWX9

Ddx47, Probable ATP-dependent RNA helicase DDX47, mousemouse

Known RBP Predictions only

Length 455 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx47Q9CWX9 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ddx47Q9CWX9 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ddx47Q9CWX9 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ddx47Q9CWX9 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ddx47Q9CWX9 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ddx47Q9CWX9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ddx47Q9CWX9 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ddx47Q9CWX9 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx47Q9CWX9 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx47Q9CWX9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx47Q9CWX9 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx47Q9CWX9 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx47Q9CWX9 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx47Q9CWX9 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx47Q9CWX9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx47Q9CWX9 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ddx47Q9CWX9 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx47Q9CWX9 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
Ddx47Q9CWX9 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx47Q9CWX9 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx47Q9CWX9 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx47Q9CWX9 Gm11687-201ENSMUST00000118911 886 ntBASIC20.67■□□□□ 0.9
Ddx47Q9CWX9 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC20.67■□□□□ 0.9
Ddx47Q9CWX9 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.67■□□□□ 0.9
Ddx47Q9CWX9 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.67■□□□□ 0.9
Ddx47Q9CWX9 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx47Q9CWX9 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ddx47Q9CWX9 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx47Q9CWX9 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Ddx47Q9CWX9 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ddx47Q9CWX9 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.65■□□□□ 0.9
Ddx47Q9CWX9 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ddx47Q9CWX9 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ddx47Q9CWX9 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Ddx47Q9CWX9 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ddx47Q9CWX9 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ddx47Q9CWX9 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ddx47Q9CWX9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ddx47Q9CWX9 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ddx47Q9CWX9 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ddx47Q9CWX9 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ddx47Q9CWX9 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ddx47Q9CWX9 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.64■□□□□ 0.89
Ddx47Q9CWX9 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ddx47Q9CWX9 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ddx47Q9CWX9 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ddx47Q9CWX9 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx47Q9CWX9 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.63■□□□□ 0.89
Ddx47Q9CWX9 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx47Q9CWX9 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx47Q9CWX9 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx47Q9CWX9 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx47Q9CWX9 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.63■□□□□ 0.89
Ddx47Q9CWX9 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Ddx47Q9CWX9 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ddx47Q9CWX9 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Ddx47Q9CWX9 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.62■□□□□ 0.89
Ddx47Q9CWX9 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ddx47Q9CWX9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Ddx47Q9CWX9 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ddx47Q9CWX9 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.62■□□□□ 0.89
Ddx47Q9CWX9 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ddx47Q9CWX9 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Ddx47Q9CWX9 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Ddx47Q9CWX9 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ddx47Q9CWX9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.61■□□□□ 0.89
Ddx47Q9CWX9 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Ddx47Q9CWX9 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx47Q9CWX9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx47Q9CWX9 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx47Q9CWX9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx47Q9CWX9 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx47Q9CWX9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx47Q9CWX9 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx47Q9CWX9 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx47Q9CWX9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx47Q9CWX9 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Ddx47Q9CWX9 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx47Q9CWX9 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Ddx47Q9CWX9 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ddx47Q9CWX9 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Ddx47Q9CWX9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Ddx47Q9CWX9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ddx47Q9CWX9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Ddx47Q9CWX9 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ddx47Q9CWX9 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.6■□□□□ 0.89
Ddx47Q9CWX9 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.6■□□□□ 0.89
Ddx47Q9CWX9 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx47Q9CWX9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx47Q9CWX9 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx47Q9CWX9 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx47Q9CWX9 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ddx47Q9CWX9 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ddx47Q9CWX9 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ddx47Q9CWX9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ddx47Q9CWX9 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Ddx47Q9CWX9 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx47Q9CWX9 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx47Q9CWX9 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ddx47Q9CWX9 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms