Protein–RNA interactions for Protein: Q9CWM4

Pfdn1, Prefoldin subunit 1, mousemouse

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn1Q9CWM4 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.69■□□□□ 0.42
Pfdn1Q9CWM4 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.69■□□□□ 0.42
Pfdn1Q9CWM4 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pfdn1Q9CWM4 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pfdn1Q9CWM4 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC17.69■□□□□ 0.42
Pfdn1Q9CWM4 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pfdn1Q9CWM4 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Pfdn1Q9CWM4 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pfdn1Q9CWM4 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC17.68■□□□□ 0.42
Pfdn1Q9CWM4 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pfdn1Q9CWM4 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC17.68■□□□□ 0.42
Pfdn1Q9CWM4 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Pfdn1Q9CWM4 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pfdn1Q9CWM4 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pfdn1Q9CWM4 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pfdn1Q9CWM4 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Pfdn1Q9CWM4 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pfdn1Q9CWM4 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.68■□□□□ 0.42
Pfdn1Q9CWM4 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pfdn1Q9CWM4 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pfdn1Q9CWM4 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pfdn1Q9CWM4 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pfdn1Q9CWM4 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Pfdn1Q9CWM4 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.67■□□□□ 0.42
Pfdn1Q9CWM4 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pfdn1Q9CWM4 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Pfdn1Q9CWM4 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.67■□□□□ 0.42
Pfdn1Q9CWM4 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pfdn1Q9CWM4 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.67■□□□□ 0.42
Pfdn1Q9CWM4 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pfdn1Q9CWM4 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Pfdn1Q9CWM4 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Pfdn1Q9CWM4 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pfdn1Q9CWM4 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pfdn1Q9CWM4 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pfdn1Q9CWM4 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
Pfdn1Q9CWM4 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Pfdn1Q9CWM4 Zfp131-205ENSMUST00000223812 663 ntBASIC17.66■□□□□ 0.42
Pfdn1Q9CWM4 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.66■□□□□ 0.42
Pfdn1Q9CWM4 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pfdn1Q9CWM4 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pfdn1Q9CWM4 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pfdn1Q9CWM4 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pfdn1Q9CWM4 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pfdn1Q9CWM4 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.65■□□□□ 0.42
Pfdn1Q9CWM4 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pfdn1Q9CWM4 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Pfdn1Q9CWM4 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.65■□□□□ 0.42
Pfdn1Q9CWM4 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
Pfdn1Q9CWM4 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pfdn1Q9CWM4 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pfdn1Q9CWM4 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
Pfdn1Q9CWM4 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pfdn1Q9CWM4 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pfdn1Q9CWM4 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pfdn1Q9CWM4 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pfdn1Q9CWM4 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.42
Pfdn1Q9CWM4 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pfdn1Q9CWM4 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pfdn1Q9CWM4 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pfdn1Q9CWM4 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pfdn1Q9CWM4 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pfdn1Q9CWM4 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Pfdn1Q9CWM4 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pfdn1Q9CWM4 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Pfdn1Q9CWM4 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Pfdn1Q9CWM4 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Pfdn1Q9CWM4 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Pfdn1Q9CWM4 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pfdn1Q9CWM4 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pfdn1Q9CWM4 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pfdn1Q9CWM4 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pfdn1Q9CWM4 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pfdn1Q9CWM4 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC17.63■□□□□ 0.41
Pfdn1Q9CWM4 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pfdn1Q9CWM4 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pfdn1Q9CWM4 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pfdn1Q9CWM4 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pfdn1Q9CWM4 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pfdn1Q9CWM4 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pfdn1Q9CWM4 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pfdn1Q9CWM4 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.62■□□□□ 0.41
Pfdn1Q9CWM4 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pfdn1Q9CWM4 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pfdn1Q9CWM4 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.62■□□□□ 0.41
Pfdn1Q9CWM4 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pfdn1Q9CWM4 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pfdn1Q9CWM4 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pfdn1Q9CWM4 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pfdn1Q9CWM4 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pfdn1Q9CWM4 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Pfdn1Q9CWM4 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pfdn1Q9CWM4 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Pfdn1Q9CWM4 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pfdn1Q9CWM4 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pfdn1Q9CWM4 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pfdn1Q9CWM4 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
Pfdn1Q9CWM4 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pfdn1Q9CWM4 Gm9397-201ENSMUST00000200125 605 ntBASIC17.61■□□□□ 0.41
Pfdn1Q9CWM4 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 135.5 ms