Protein–RNA interactions for Protein: Q9CQC3

Protein C9orf135 homolog, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CQC3 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.98■□□□□ 0.95
Q9CQC3 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Q9CQC3 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Q9CQC3 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Q9CQC3 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Q9CQC3 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
Q9CQC3 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Q9CQC3 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Q9CQC3 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Q9CQC3 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Q9CQC3 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Q9CQC3 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Q9CQC3 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Q9CQC3 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Q9CQC3 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.96■□□□□ 0.95
Q9CQC3 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Q9CQC3 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
Q9CQC3 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Q9CQC3 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Q9CQC3 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Q9CQC3 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.95■□□□□ 0.94
Q9CQC3 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Q9CQC3 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Q9CQC3 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.95■□□□□ 0.94
Q9CQC3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.95■□□□□ 0.94
Q9CQC3 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.95■□□□□ 0.94
Q9CQC3 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Q9CQC3 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Q9CQC3 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Q9CQC3 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Q9CQC3 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Q9CQC3 Mir6236-201ENSMUST00000184437 123 ntBASIC20.94■□□□□ 0.94
Q9CQC3 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Q9CQC3 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Q9CQC3 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Q9CQC3 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Q9CQC3 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Q9CQC3 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Q9CQC3 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Q9CQC3 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Q9CQC3 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Q9CQC3 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Q9CQC3 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Q9CQC3 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Q9CQC3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC20.92■□□□□ 0.94
Q9CQC3 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.92■□□□□ 0.94
Q9CQC3 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Q9CQC3 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Q9CQC3 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Q9CQC3 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Q9CQC3 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.91■□□□□ 0.94
Q9CQC3 Gm12922-201ENSMUST00000120626 809 ntBASIC20.91■□□□□ 0.94
Q9CQC3 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Q9CQC3 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC20.91■□□□□ 0.94
Q9CQC3 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.91■□□□□ 0.94
Q9CQC3 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Q9CQC3 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Q9CQC3 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Q9CQC3 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Q9CQC3 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Q9CQC3 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Q9CQC3 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Q9CQC3 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Q9CQC3 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Q9CQC3 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Q9CQC3 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Q9CQC3 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Q9CQC3 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
Q9CQC3 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Q9CQC3 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
Q9CQC3 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Q9CQC3 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.89■□□□□ 0.93
Q9CQC3 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.89■□□□□ 0.93
Q9CQC3 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.89■□□□□ 0.93
Q9CQC3 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Q9CQC3 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Q9CQC3 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.89■□□□□ 0.93
Q9CQC3 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Q9CQC3 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Q9CQC3 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Q9CQC3 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Q9CQC3 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Q9CQC3 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.88■□□□□ 0.93
Q9CQC3 Golgb1-201ENSMUST00000023534 498 ntBASIC20.88■□□□□ 0.93
Q9CQC3 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Q9CQC3 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Q9CQC3 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Q9CQC3 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Q9CQC3 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Q9CQC3 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.87■□□□□ 0.93
Q9CQC3 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Q9CQC3 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.87■□□□□ 0.93
Q9CQC3 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Q9CQC3 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Q9CQC3 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Q9CQC3 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Q9CQC3 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Q9CQC3 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Q9CQC3 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Q9CQC3 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms