Protein–RNA interactions for Protein: Q9CPW3

Mrpl54, 39S ribosomal protein L54, mitochondrial, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl54Q9CPW3 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Mrpl54Q9CPW3 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Mrpl54Q9CPW3 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Mrpl54Q9CPW3 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Mrpl54Q9CPW3 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mrpl54Q9CPW3 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mrpl54Q9CPW3 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mrpl54Q9CPW3 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.89■□□□□ 0.45
Mrpl54Q9CPW3 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mrpl54Q9CPW3 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mrpl54Q9CPW3 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mrpl54Q9CPW3 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Mrpl54Q9CPW3 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Mrpl54Q9CPW3 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Mrpl54Q9CPW3 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mrpl54Q9CPW3 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Mrpl54Q9CPW3 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mrpl54Q9CPW3 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mrpl54Q9CPW3 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Mrpl54Q9CPW3 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mrpl54Q9CPW3 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mrpl54Q9CPW3 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mrpl54Q9CPW3 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mrpl54Q9CPW3 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.87■□□□□ 0.45
Mrpl54Q9CPW3 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mrpl54Q9CPW3 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mrpl54Q9CPW3 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mrpl54Q9CPW3 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mrpl54Q9CPW3 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mrpl54Q9CPW3 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Mrpl54Q9CPW3 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Mrpl54Q9CPW3 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.87■□□□□ 0.45
Mrpl54Q9CPW3 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mrpl54Q9CPW3 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Mrpl54Q9CPW3 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Mrpl54Q9CPW3 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mrpl54Q9CPW3 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
Mrpl54Q9CPW3 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Mrpl54Q9CPW3 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mrpl54Q9CPW3 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC17.85■□□□□ 0.45
Mrpl54Q9CPW3 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Mrpl54Q9CPW3 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Mrpl54Q9CPW3 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mrpl54Q9CPW3 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mrpl54Q9CPW3 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mrpl54Q9CPW3 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Mrpl54Q9CPW3 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Mrpl54Q9CPW3 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC17.84■□□□□ 0.45
Mrpl54Q9CPW3 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mrpl54Q9CPW3 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Mrpl54Q9CPW3 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mrpl54Q9CPW3 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.84■□□□□ 0.45
Mrpl54Q9CPW3 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Mrpl54Q9CPW3 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Mrpl54Q9CPW3 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
Mrpl54Q9CPW3 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Mrpl54Q9CPW3 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Mrpl54Q9CPW3 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.83■□□□□ 0.44
Mrpl54Q9CPW3 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Mrpl54Q9CPW3 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Mrpl54Q9CPW3 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
Mrpl54Q9CPW3 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.83■□□□□ 0.44
Mrpl54Q9CPW3 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Mrpl54Q9CPW3 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mrpl54Q9CPW3 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Mrpl54Q9CPW3 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Mrpl54Q9CPW3 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.82■□□□□ 0.44
Mrpl54Q9CPW3 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Mrpl54Q9CPW3 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Mrpl54Q9CPW3 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Mrpl54Q9CPW3 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mrpl54Q9CPW3 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mrpl54Q9CPW3 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Mrpl54Q9CPW3 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mrpl54Q9CPW3 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mrpl54Q9CPW3 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mrpl54Q9CPW3 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Mrpl54Q9CPW3 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.82■□□□□ 0.44
Mrpl54Q9CPW3 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mrpl54Q9CPW3 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mrpl54Q9CPW3 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mrpl54Q9CPW3 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mrpl54Q9CPW3 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Mrpl54Q9CPW3 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mrpl54Q9CPW3 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mrpl54Q9CPW3 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mrpl54Q9CPW3 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mrpl54Q9CPW3 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mrpl54Q9CPW3 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mrpl54Q9CPW3 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Mrpl54Q9CPW3 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Mrpl54Q9CPW3 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Mrpl54Q9CPW3 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Mrpl54Q9CPW3 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.8■□□□□ 0.44
Mrpl54Q9CPW3 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Mrpl54Q9CPW3 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Mrpl54Q9CPW3 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.8■□□□□ 0.44
Mrpl54Q9CPW3 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Mrpl54Q9CPW3 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Mrpl54Q9CPW3 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms