Protein–RNA interactions for Protein: Q99ML9

Rnf111, E3 ubiquitin-protein ligase Arkadia, mousemouse

Predictions only

Length 989 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf111Q99ML9 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf111Q99ML9 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf111Q99ML9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf111Q99ML9 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf111Q99ML9 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf111Q99ML9 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf111Q99ML9 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.5■□□□□ 0.71
Rnf111Q99ML9 Gm10399-202ENSMUST00000202768 748 ntBASIC19.5■□□□□ 0.71
Rnf111Q99ML9 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Rnf111Q99ML9 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf111Q99ML9 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf111Q99ML9 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf111Q99ML9 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf111Q99ML9 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf111Q99ML9 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf111Q99ML9 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf111Q99ML9 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf111Q99ML9 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf111Q99ML9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf111Q99ML9 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Rnf111Q99ML9 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Rnf111Q99ML9 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.48■□□□□ 0.71
Rnf111Q99ML9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf111Q99ML9 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf111Q99ML9 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf111Q99ML9 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.48■□□□□ 0.71
Rnf111Q99ML9 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf111Q99ML9 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf111Q99ML9 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf111Q99ML9 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf111Q99ML9 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf111Q99ML9 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf111Q99ML9 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf111Q99ML9 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf111Q99ML9 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
Rnf111Q99ML9 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf111Q99ML9 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf111Q99ML9 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf111Q99ML9 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf111Q99ML9 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.47■□□□□ 0.71
Rnf111Q99ML9 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf111Q99ML9 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf111Q99ML9 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Rnf111Q99ML9 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf111Q99ML9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf111Q99ML9 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf111Q99ML9 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf111Q99ML9 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf111Q99ML9 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf111Q99ML9 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf111Q99ML9 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf111Q99ML9 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf111Q99ML9 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf111Q99ML9 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf111Q99ML9 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.46■□□□□ 0.71
Rnf111Q99ML9 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf111Q99ML9 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.46■□□□□ 0.71
Rnf111Q99ML9 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf111Q99ML9 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf111Q99ML9 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf111Q99ML9 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf111Q99ML9 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf111Q99ML9 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.45■□□□□ 0.7
Rnf111Q99ML9 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf111Q99ML9 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf111Q99ML9 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.45■□□□□ 0.7
Rnf111Q99ML9 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.44■□□□□ 0.7
Rnf111Q99ML9 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Rnf111Q99ML9 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf111Q99ML9 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf111Q99ML9 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf111Q99ML9 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.44■□□□□ 0.7
Rnf111Q99ML9 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Rnf111Q99ML9 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf111Q99ML9 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.44■□□□□ 0.7
Rnf111Q99ML9 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rnf111Q99ML9 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Rnf111Q99ML9 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf111Q99ML9 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf111Q99ML9 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
Rnf111Q99ML9 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf111Q99ML9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rnf111Q99ML9 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf111Q99ML9 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf111Q99ML9 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.42■□□□□ 0.7
Rnf111Q99ML9 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.42■□□□□ 0.7
Rnf111Q99ML9 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf111Q99ML9 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Rnf111Q99ML9 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC19.42■□□□□ 0.7
Rnf111Q99ML9 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf111Q99ML9 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rnf111Q99ML9 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf111Q99ML9 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.41■□□□□ 0.7
Rnf111Q99ML9 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf111Q99ML9 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf111Q99ML9 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Rnf111Q99ML9 Gm40881-201ENSMUST00000223397 166 ntBASIC19.41■□□□□ 0.7
Rnf111Q99ML9 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf111Q99ML9 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rnf111Q99ML9 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms