Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC20.11■□□□□ 0.81
Cstf1Q99LC2 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cstf1Q99LC2 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.11■□□□□ 0.81
Cstf1Q99LC2 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.11■□□□□ 0.81
Cstf1Q99LC2 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cstf1Q99LC2 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cstf1Q99LC2 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Cstf1Q99LC2 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Cstf1Q99LC2 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cstf1Q99LC2 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cstf1Q99LC2 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cstf1Q99LC2 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cstf1Q99LC2 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
Cstf1Q99LC2 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cstf1Q99LC2 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cstf1Q99LC2 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Cstf1Q99LC2 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cstf1Q99LC2 Gm12933-201ENSMUST00000120203 872 ntBASIC20.09■□□□□ 0.81
Cstf1Q99LC2 Gm11421-201ENSMUST00000122124 294 ntBASIC20.09■□□□□ 0.81
Cstf1Q99LC2 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cstf1Q99LC2 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cstf1Q99LC2 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.09■□□□□ 0.81
Cstf1Q99LC2 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cstf1Q99LC2 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.08■□□□□ 0.81
Cstf1Q99LC2 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.08■□□□□ 0.81
Cstf1Q99LC2 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cstf1Q99LC2 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cstf1Q99LC2 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.08■□□□□ 0.81
Cstf1Q99LC2 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.08■□□□□ 0.81
Cstf1Q99LC2 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Cstf1Q99LC2 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC20.08■□□□□ 0.81
Cstf1Q99LC2 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Cstf1Q99LC2 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.08■□□□□ 0.81
Cstf1Q99LC2 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.08■□□□□ 0.8
Cstf1Q99LC2 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Cstf1Q99LC2 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Cstf1Q99LC2 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cstf1Q99LC2 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cstf1Q99LC2 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Cstf1Q99LC2 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cstf1Q99LC2 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.07■□□□□ 0.8
Cstf1Q99LC2 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cstf1Q99LC2 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Cstf1Q99LC2 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.07■□□□□ 0.8
Cstf1Q99LC2 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Cstf1Q99LC2 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cstf1Q99LC2 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Cstf1Q99LC2 Gm9988-201ENSMUST00000069786 435 ntBASIC20.07■□□□□ 0.8
Cstf1Q99LC2 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cstf1Q99LC2 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.07■□□□□ 0.8
Cstf1Q99LC2 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
Cstf1Q99LC2 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.07■□□□□ 0.8
Cstf1Q99LC2 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Cstf1Q99LC2 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cstf1Q99LC2 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cstf1Q99LC2 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC20.06■□□□□ 0.8
Cstf1Q99LC2 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Cstf1Q99LC2 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cstf1Q99LC2 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Cstf1Q99LC2 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cstf1Q99LC2 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
Cstf1Q99LC2 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cstf1Q99LC2 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Cstf1Q99LC2 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Cstf1Q99LC2 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Cstf1Q99LC2 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cstf1Q99LC2 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cstf1Q99LC2 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Cstf1Q99LC2 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Cstf1Q99LC2 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.05■□□□□ 0.8
Cstf1Q99LC2 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cstf1Q99LC2 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cstf1Q99LC2 Gm6277-202ENSMUST00000224036 2779 ntBASIC20.05■□□□□ 0.8
Cstf1Q99LC2 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cstf1Q99LC2 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Cstf1Q99LC2 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cstf1Q99LC2 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.04■□□□□ 0.8
Cstf1Q99LC2 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.04■□□□□ 0.8
Cstf1Q99LC2 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.04■□□□□ 0.8
Cstf1Q99LC2 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cstf1Q99LC2 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Cstf1Q99LC2 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.04■□□□□ 0.8
Cstf1Q99LC2 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cstf1Q99LC2 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Cstf1Q99LC2 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cstf1Q99LC2 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cstf1Q99LC2 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cstf1Q99LC2 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cstf1Q99LC2 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cstf1Q99LC2 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.03■□□□□ 0.8
Cstf1Q99LC2 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Cstf1Q99LC2 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cstf1Q99LC2 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cstf1Q99LC2 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cstf1Q99LC2 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Cstf1Q99LC2 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Cstf1Q99LC2 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cstf1Q99LC2 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cstf1Q99LC2 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cstf1Q99LC2 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms