Protein–RNA interactions for Protein: Q99J62

Rfc4, Replication factor C subunit 4, mousemouse

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc4Q99J62 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Rfc4Q99J62 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Rfc4Q99J62 Gm27045-201ENSMUST00000182145 1402 ntBASIC23.33■■□□□ 1.32
Rfc4Q99J62 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rfc4Q99J62 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rfc4Q99J62 Dmtn-209ENSMUST00000228295 2572 ntBASIC23.32■■□□□ 1.32
Rfc4Q99J62 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC23.32■■□□□ 1.32
Rfc4Q99J62 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Rfc4Q99J62 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rfc4Q99J62 Gm10033-202ENSMUST00000211874 928 ntBASIC23.32■■□□□ 1.32
Rfc4Q99J62 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rfc4Q99J62 Gm37415-201ENSMUST00000192265 2054 ntBASIC23.32■■□□□ 1.32
Rfc4Q99J62 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Rfc4Q99J62 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Rfc4Q99J62 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
Rfc4Q99J62 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Rfc4Q99J62 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC23.31■■□□□ 1.32
Rfc4Q99J62 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Rfc4Q99J62 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Rfc4Q99J62 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Rfc4Q99J62 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Rfc4Q99J62 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rfc4Q99J62 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rfc4Q99J62 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC23.3■■□□□ 1.32
Rfc4Q99J62 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC23.3■■□□□ 1.32
Rfc4Q99J62 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rfc4Q99J62 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rfc4Q99J62 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rfc4Q99J62 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Rfc4Q99J62 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Rfc4Q99J62 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Rfc4Q99J62 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Rfc4Q99J62 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rfc4Q99J62 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Rfc4Q99J62 Gm11421-201ENSMUST00000122124 294 ntBASIC23.29■■□□□ 1.32
Rfc4Q99J62 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC23.29■■□□□ 1.32
Rfc4Q99J62 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Rfc4Q99J62 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
Rfc4Q99J62 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC23.29■■□□□ 1.32
Rfc4Q99J62 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Rfc4Q99J62 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rfc4Q99J62 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rfc4Q99J62 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
Rfc4Q99J62 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rfc4Q99J62 CT025689.6-201ENSMUST00000224991 1104 ntBASIC23.28■■□□□ 1.32
Rfc4Q99J62 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rfc4Q99J62 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Rfc4Q99J62 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rfc4Q99J62 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rfc4Q99J62 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rfc4Q99J62 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rfc4Q99J62 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rfc4Q99J62 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rfc4Q99J62 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rfc4Q99J62 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC23.27■■□□□ 1.32
Rfc4Q99J62 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Rfc4Q99J62 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rfc4Q99J62 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rfc4Q99J62 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rfc4Q99J62 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Rfc4Q99J62 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rfc4Q99J62 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rfc4Q99J62 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rfc4Q99J62 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rfc4Q99J62 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC23.25■■□□□ 1.31
Rfc4Q99J62 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rfc4Q99J62 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rfc4Q99J62 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rfc4Q99J62 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rfc4Q99J62 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rfc4Q99J62 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC23.25■■□□□ 1.31
Rfc4Q99J62 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rfc4Q99J62 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rfc4Q99J62 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Rfc4Q99J62 Gm32051-202ENSMUST00000197905 2385 ntBASIC23.24■■□□□ 1.31
Rfc4Q99J62 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Rfc4Q99J62 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Rfc4Q99J62 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC23.24■■□□□ 1.31
Rfc4Q99J62 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC23.23■■□□□ 1.31
Rfc4Q99J62 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rfc4Q99J62 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC23.23■■□□□ 1.31
Rfc4Q99J62 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Rfc4Q99J62 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rfc4Q99J62 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rfc4Q99J62 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rfc4Q99J62 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC23.23■■□□□ 1.31
Rfc4Q99J62 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Rfc4Q99J62 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Rfc4Q99J62 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC23.22■■□□□ 1.31
Rfc4Q99J62 Gm27011-201ENSMUST00000182352 972 ntBASIC23.22■■□□□ 1.31
Rfc4Q99J62 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC23.22■■□□□ 1.31
Rfc4Q99J62 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC23.22■■□□□ 1.31
Rfc4Q99J62 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rfc4Q99J62 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rfc4Q99J62 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rfc4Q99J62 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC23.22■■□□□ 1.31
Rfc4Q99J62 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rfc4Q99J62 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rfc4Q99J62 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rfc4Q99J62 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms