Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Thumpd1Q99J36 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
Thumpd1Q99J36 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Thumpd1Q99J36 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Thumpd1Q99J36 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Thumpd1Q99J36 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Thumpd1Q99J36 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Thumpd1Q99J36 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Thumpd1Q99J36 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Thumpd1Q99J36 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Thumpd1Q99J36 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.9■□□□□ 0.46
Thumpd1Q99J36 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Thumpd1Q99J36 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Thumpd1Q99J36 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Thumpd1Q99J36 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
Thumpd1Q99J36 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Thumpd1Q99J36 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Thumpd1Q99J36 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Thumpd1Q99J36 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Thumpd1Q99J36 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Thumpd1Q99J36 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Thumpd1Q99J36 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Thumpd1Q99J36 Gm10420-201ENSMUST00000121713 882 ntBASIC17.89■□□□□ 0.45
Thumpd1Q99J36 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Thumpd1Q99J36 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Thumpd1Q99J36 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Thumpd1Q99J36 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Thumpd1Q99J36 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Thumpd1Q99J36 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Thumpd1Q99J36 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Thumpd1Q99J36 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Thumpd1Q99J36 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Thumpd1Q99J36 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Thumpd1Q99J36 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Thumpd1Q99J36 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Thumpd1Q99J36 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Thumpd1Q99J36 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Thumpd1Q99J36 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Thumpd1Q99J36 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Thumpd1Q99J36 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.87■□□□□ 0.45
Thumpd1Q99J36 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Thumpd1Q99J36 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
Thumpd1Q99J36 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.87■□□□□ 0.45
Thumpd1Q99J36 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
Thumpd1Q99J36 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Thumpd1Q99J36 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Thumpd1Q99J36 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Thumpd1Q99J36 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.87■□□□□ 0.45
Thumpd1Q99J36 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Thumpd1Q99J36 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Thumpd1Q99J36 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Thumpd1Q99J36 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Thumpd1Q99J36 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Thumpd1Q99J36 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.86■□□□□ 0.45
Thumpd1Q99J36 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Thumpd1Q99J36 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Thumpd1Q99J36 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Thumpd1Q99J36 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Thumpd1Q99J36 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Thumpd1Q99J36 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Thumpd1Q99J36 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Thumpd1Q99J36 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Thumpd1Q99J36 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Thumpd1Q99J36 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Thumpd1Q99J36 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Thumpd1Q99J36 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Thumpd1Q99J36 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Thumpd1Q99J36 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Thumpd1Q99J36 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Thumpd1Q99J36 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Thumpd1Q99J36 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Thumpd1Q99J36 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Thumpd1Q99J36 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Thumpd1Q99J36 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Thumpd1Q99J36 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Thumpd1Q99J36 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Thumpd1Q99J36 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Thumpd1Q99J36 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Thumpd1Q99J36 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Thumpd1Q99J36 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.84■□□□□ 0.45
Thumpd1Q99J36 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Thumpd1Q99J36 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Thumpd1Q99J36 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.84■□□□□ 0.45
Thumpd1Q99J36 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.83■□□□□ 0.45
Thumpd1Q99J36 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Thumpd1Q99J36 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Thumpd1Q99J36 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Thumpd1Q99J36 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Thumpd1Q99J36 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC17.83■□□□□ 0.44
Thumpd1Q99J36 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Thumpd1Q99J36 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Thumpd1Q99J36 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Thumpd1Q99J36 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Thumpd1Q99J36 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Thumpd1Q99J36 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Thumpd1Q99J36 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Thumpd1Q99J36 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Thumpd1Q99J36 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Thumpd1Q99J36 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Thumpd1Q99J36 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.82■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms