Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhac1Q91Y10 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Pcdhac1Q91Y10 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhac1Q91Y10 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Pcdhac1Q91Y10 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Pcdhac1Q91Y10 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.74■□□□□ 0.59
Pcdhac1Q91Y10 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhac1Q91Y10 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhac1Q91Y10 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhac1Q91Y10 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhac1Q91Y10 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC18.74■□□□□ 0.59
Pcdhac1Q91Y10 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhac1Q91Y10 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhac1Q91Y10 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhac1Q91Y10 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhac1Q91Y10 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhac1Q91Y10 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhac1Q91Y10 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Pcdhac1Q91Y10 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdhac1Q91Y10 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhac1Q91Y10 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhac1Q91Y10 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhac1Q91Y10 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhac1Q91Y10 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhac1Q91Y10 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Pcdhac1Q91Y10 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhac1Q91Y10 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.73■□□□□ 0.59
Pcdhac1Q91Y10 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhac1Q91Y10 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.73■□□□□ 0.59
Pcdhac1Q91Y10 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhac1Q91Y10 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhac1Q91Y10 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
Pcdhac1Q91Y10 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhac1Q91Y10 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhac1Q91Y10 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhac1Q91Y10 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdhac1Q91Y10 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Pcdhac1Q91Y10 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhac1Q91Y10 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhac1Q91Y10 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhac1Q91Y10 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhac1Q91Y10 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhac1Q91Y10 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhac1Q91Y10 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhac1Q91Y10 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhac1Q91Y10 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhac1Q91Y10 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Pcdhac1Q91Y10 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pcdhac1Q91Y10 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.72■□□□□ 0.59
Pcdhac1Q91Y10 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.71■□□□□ 0.59
Pcdhac1Q91Y10 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhac1Q91Y10 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhac1Q91Y10 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhac1Q91Y10 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.71■□□□□ 0.59
Pcdhac1Q91Y10 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.71■□□□□ 0.59
Pcdhac1Q91Y10 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Pcdhac1Q91Y10 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Pcdhac1Q91Y10 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhac1Q91Y10 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pcdhac1Q91Y10 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhac1Q91Y10 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhac1Q91Y10 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhac1Q91Y10 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhac1Q91Y10 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhac1Q91Y10 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhac1Q91Y10 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhac1Q91Y10 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhac1Q91Y10 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.7■□□□□ 0.58
Pcdhac1Q91Y10 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pcdhac1Q91Y10 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhac1Q91Y10 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhac1Q91Y10 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.69■□□□□ 0.58
Pcdhac1Q91Y10 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhac1Q91Y10 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.69■□□□□ 0.58
Pcdhac1Q91Y10 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhac1Q91Y10 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Pcdhac1Q91Y10 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pcdhac1Q91Y10 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.69■□□□□ 0.58
Pcdhac1Q91Y10 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
Pcdhac1Q91Y10 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.68■□□□□ 0.58
Pcdhac1Q91Y10 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhac1Q91Y10 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Pcdhac1Q91Y10 Gm40881-201ENSMUST00000223397 166 ntBASIC18.68■□□□□ 0.58
Pcdhac1Q91Y10 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhac1Q91Y10 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Pcdhac1Q91Y10 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhac1Q91Y10 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhac1Q91Y10 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhac1Q91Y10 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhac1Q91Y10 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhac1Q91Y10 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhac1Q91Y10 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pcdhac1Q91Y10 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhac1Q91Y10 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
Pcdhac1Q91Y10 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pcdhac1Q91Y10 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.67■□□□□ 0.58
Pcdhac1Q91Y10 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
Pcdhac1Q91Y10 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.67■□□□□ 0.58
Pcdhac1Q91Y10 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.67■□□□□ 0.58
Pcdhac1Q91Y10 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 38.2 ms