Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
Pcdhb22Q91XZ8 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdhb22Q91XZ8 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdhb22Q91XZ8 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdhb22Q91XZ8 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhb22Q91XZ8 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhb22Q91XZ8 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhb22Q91XZ8 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhb22Q91XZ8 AC140930.3-201ENSMUST00000222935 274 ntBASIC23.55■■□□□ 1.36
Pcdhb22Q91XZ8 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhb22Q91XZ8 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhb22Q91XZ8 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhb22Q91XZ8 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Pcdhb22Q91XZ8 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC23.54■■□□□ 1.36
Pcdhb22Q91XZ8 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhb22Q91XZ8 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhb22Q91XZ8 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhb22Q91XZ8 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
Pcdhb22Q91XZ8 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC23.54■■□□□ 1.36
Pcdhb22Q91XZ8 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhb22Q91XZ8 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhb22Q91XZ8 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdhb22Q91XZ8 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdhb22Q91XZ8 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdhb22Q91XZ8 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdhb22Q91XZ8 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdhb22Q91XZ8 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC23.53■■□□□ 1.36
Pcdhb22Q91XZ8 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdhb22Q91XZ8 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdhb22Q91XZ8 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdhb22Q91XZ8 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdhb22Q91XZ8 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdhb22Q91XZ8 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdhb22Q91XZ8 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhb22Q91XZ8 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC23.52■■□□□ 1.36
Pcdhb22Q91XZ8 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
Pcdhb22Q91XZ8 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhb22Q91XZ8 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhb22Q91XZ8 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhb22Q91XZ8 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhb22Q91XZ8 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdhb22Q91XZ8 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdhb22Q91XZ8 Gm27045-201ENSMUST00000182145 1402 ntBASIC23.51■■□□□ 1.35
Pcdhb22Q91XZ8 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdhb22Q91XZ8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC23.51■■□□□ 1.35
Pcdhb22Q91XZ8 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.35
Pcdhb22Q91XZ8 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdhb22Q91XZ8 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdhb22Q91XZ8 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdhb22Q91XZ8 Hsf1-207ENSMUST00000228371 2102 ntBASIC23.51■■□□□ 1.35
Pcdhb22Q91XZ8 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdhb22Q91XZ8 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdhb22Q91XZ8 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC23.5■■□□□ 1.35
Pcdhb22Q91XZ8 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC23.5■■□□□ 1.35
Pcdhb22Q91XZ8 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC23.5■■□□□ 1.35
Pcdhb22Q91XZ8 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Pcdhb22Q91XZ8 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhb22Q91XZ8 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC23.49■■□□□ 1.35
Pcdhb22Q91XZ8 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhb22Q91XZ8 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhb22Q91XZ8 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhb22Q91XZ8 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhb22Q91XZ8 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhb22Q91XZ8 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC23.49■■□□□ 1.35
Pcdhb22Q91XZ8 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC23.49■■□□□ 1.35
Pcdhb22Q91XZ8 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Pcdhb22Q91XZ8 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC23.49■■□□□ 1.35
Pcdhb22Q91XZ8 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdhb22Q91XZ8 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC23.48■■□□□ 1.35
Pcdhb22Q91XZ8 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdhb22Q91XZ8 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdhb22Q91XZ8 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdhb22Q91XZ8 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
Pcdhb22Q91XZ8 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
Pcdhb22Q91XZ8 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC23.48■■□□□ 1.35
Pcdhb22Q91XZ8 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdhb22Q91XZ8 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC23.48■■□□□ 1.35
Pcdhb22Q91XZ8 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
Pcdhb22Q91XZ8 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdhb22Q91XZ8 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdhb22Q91XZ8 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdhb22Q91XZ8 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
Pcdhb22Q91XZ8 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC23.47■■□□□ 1.35
Pcdhb22Q91XZ8 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdhb22Q91XZ8 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdhb22Q91XZ8 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
Pcdhb22Q91XZ8 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC23.47■■□□□ 1.35
Pcdhb22Q91XZ8 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdhb22Q91XZ8 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdhb22Q91XZ8 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
Pcdhb22Q91XZ8 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC23.46■■□□□ 1.35
Pcdhb22Q91XZ8 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Pcdhb22Q91XZ8 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Pcdhb22Q91XZ8 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Pcdhb22Q91XZ8 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC23.45■■□□□ 1.35
Pcdhb22Q91XZ8 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC23.45■■□□□ 1.34
Pcdhb22Q91XZ8 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Pcdhb22Q91XZ8 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Pcdhb22Q91XZ8 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Pcdhb22Q91XZ8 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms