Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhgb4Q91XX6 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.3■■□□□ 1
Pcdhgb4Q91XX6 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhgb4Q91XX6 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Pcdhgb4Q91XX6 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pcdhgb4Q91XX6 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.29■■□□□ 1
Pcdhgb4Q91XX6 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhgb4Q91XX6 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhgb4Q91XX6 AC093043.1-201ENSMUST00000226700 898 ntBASIC21.29■■□□□ 1
Pcdhgb4Q91XX6 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
Pcdhgb4Q91XX6 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhgb4Q91XX6 Gm9959-201ENSMUST00000068277 390 ntBASIC21.29■■□□□ 1
Pcdhgb4Q91XX6 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhgb4Q91XX6 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Pcdhgb4Q91XX6 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhgb4Q91XX6 Etf1-202ENSMUST00000180351 108 ntBASIC21.28■■□□□ 1
Pcdhgb4Q91XX6 Gm7417-201ENSMUST00000192950 473 ntBASIC21.28■■□□□ 1
Pcdhgb4Q91XX6 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhgb4Q91XX6 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC21.28■■□□□ 1
Pcdhgb4Q91XX6 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhgb4Q91XX6 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhgb4Q91XX6 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhgb4Q91XX6 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
Pcdhgb4Q91XX6 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhgb4Q91XX6 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Pcdhgb4Q91XX6 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Pcdhgb4Q91XX6 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhgb4Q91XX6 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.27■■□□□ 1
Pcdhgb4Q91XX6 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhgb4Q91XX6 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhgb4Q91XX6 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.27■■□□□ 1
Pcdhgb4Q91XX6 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhgb4Q91XX6 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC21.27■■□□□ 1
Pcdhgb4Q91XX6 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhgb4Q91XX6 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Pcdhgb4Q91XX6 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC21.27■■□□□ 1
Pcdhgb4Q91XX6 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhgb4Q91XX6 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhgb4Q91XX6 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Pcdhgb4Q91XX6 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhgb4Q91XX6 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhgb4Q91XX6 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhgb4Q91XX6 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhgb4Q91XX6 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Pcdhgb4Q91XX6 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Pcdhgb4Q91XX6 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhgb4Q91XX6 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhgb4Q91XX6 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Pcdhgb4Q91XX6 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Pcdhgb4Q91XX6 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.24■□□□□ 0.99
Pcdhgb4Q91XX6 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhgb4Q91XX6 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhgb4Q91XX6 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Pcdhgb4Q91XX6 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhgb4Q91XX6 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhgb4Q91XX6 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Pcdhgb4Q91XX6 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhgb4Q91XX6 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC21.23■□□□□ 0.99
Pcdhgb4Q91XX6 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhgb4Q91XX6 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhgb4Q91XX6 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhgb4Q91XX6 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Pcdhgb4Q91XX6 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgb4Q91XX6 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgb4Q91XX6 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgb4Q91XX6 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgb4Q91XX6 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgb4Q91XX6 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgb4Q91XX6 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.22■□□□□ 0.99
Pcdhgb4Q91XX6 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.22■□□□□ 0.99
Pcdhgb4Q91XX6 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.22■□□□□ 0.99
Pcdhgb4Q91XX6 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.22■□□□□ 0.99
Pcdhgb4Q91XX6 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.22■□□□□ 0.99
Pcdhgb4Q91XX6 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC21.22■□□□□ 0.99
Pcdhgb4Q91XX6 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgb4Q91XX6 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgb4Q91XX6 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgb4Q91XX6 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgb4Q91XX6 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgb4Q91XX6 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgb4Q91XX6 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Pcdhgb4Q91XX6 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Pcdhgb4Q91XX6 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhgb4Q91XX6 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhgb4Q91XX6 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhgb4Q91XX6 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhgb4Q91XX6 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhgb4Q91XX6 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhgb4Q91XX6 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Pcdhgb4Q91XX6 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.2■□□□□ 0.99
Pcdhgb4Q91XX6 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhgb4Q91XX6 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhgb4Q91XX6 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC21.2■□□□□ 0.98
Pcdhgb4Q91XX6 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhgb4Q91XX6 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.2■□□□□ 0.98
Pcdhgb4Q91XX6 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhgb4Q91XX6 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhgb4Q91XX6 Gm9870-201ENSMUST00000063874 645 ntBASIC21.2■□□□□ 0.98
Pcdhgb4Q91XX6 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Pcdhgb4Q91XX6 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms