Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TraipQ8VIG6 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
TraipQ8VIG6 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21.52■■□□□ 1.04
TraipQ8VIG6 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC21.52■■□□□ 1.04
TraipQ8VIG6 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
TraipQ8VIG6 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TraipQ8VIG6 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.51■■□□□ 1.03
TraipQ8VIG6 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TraipQ8VIG6 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TraipQ8VIG6 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TraipQ8VIG6 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
TraipQ8VIG6 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TraipQ8VIG6 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TraipQ8VIG6 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TraipQ8VIG6 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TraipQ8VIG6 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TraipQ8VIG6 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
TraipQ8VIG6 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TraipQ8VIG6 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
TraipQ8VIG6 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
TraipQ8VIG6 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TraipQ8VIG6 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TraipQ8VIG6 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TraipQ8VIG6 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TraipQ8VIG6 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TraipQ8VIG6 AC165080.2-201ENSMUST00000217491 1530 ntBASIC21.49■■□□□ 1.03
TraipQ8VIG6 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TraipQ8VIG6 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TraipQ8VIG6 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TraipQ8VIG6 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
TraipQ8VIG6 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.49■■□□□ 1.03
TraipQ8VIG6 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.48■■□□□ 1.03
TraipQ8VIG6 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TraipQ8VIG6 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TraipQ8VIG6 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TraipQ8VIG6 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TraipQ8VIG6 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TraipQ8VIG6 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TraipQ8VIG6 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TraipQ8VIG6 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TraipQ8VIG6 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TraipQ8VIG6 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TraipQ8VIG6 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TraipQ8VIG6 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TraipQ8VIG6 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.47■■□□□ 1.03
TraipQ8VIG6 Gm10493-201ENSMUST00000097270 612 ntBASIC21.47■■□□□ 1.03
TraipQ8VIG6 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TraipQ8VIG6 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TraipQ8VIG6 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TraipQ8VIG6 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
TraipQ8VIG6 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TraipQ8VIG6 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.46■■□□□ 1.03
TraipQ8VIG6 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
TraipQ8VIG6 Gm5874-201ENSMUST00000096101 508 ntBASIC21.46■■□□□ 1.03
TraipQ8VIG6 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TraipQ8VIG6 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC21.45■■□□□ 1.03
TraipQ8VIG6 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TraipQ8VIG6 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TraipQ8VIG6 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
TraipQ8VIG6 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.45■■□□□ 1.02
TraipQ8VIG6 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
TraipQ8VIG6 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TraipQ8VIG6 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TraipQ8VIG6 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.44■■□□□ 1.02
TraipQ8VIG6 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TraipQ8VIG6 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TraipQ8VIG6 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.44■■□□□ 1.02
TraipQ8VIG6 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TraipQ8VIG6 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
TraipQ8VIG6 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TraipQ8VIG6 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TraipQ8VIG6 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TraipQ8VIG6 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TraipQ8VIG6 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TraipQ8VIG6 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TraipQ8VIG6 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC21.43■■□□□ 1.02
TraipQ8VIG6 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TraipQ8VIG6 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
TraipQ8VIG6 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TraipQ8VIG6 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TraipQ8VIG6 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TraipQ8VIG6 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TraipQ8VIG6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TraipQ8VIG6 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.42■■□□□ 1.02
TraipQ8VIG6 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TraipQ8VIG6 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC21.42■■□□□ 1.02
TraipQ8VIG6 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.42■■□□□ 1.02
TraipQ8VIG6 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TraipQ8VIG6 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
TraipQ8VIG6 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.42■■□□□ 1.02
TraipQ8VIG6 Slc35b2-207ENSMUST00000226086 850 ntBASIC21.42■■□□□ 1.02
TraipQ8VIG6 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TraipQ8VIG6 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
TraipQ8VIG6 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.41■■□□□ 1.02
TraipQ8VIG6 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
TraipQ8VIG6 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
TraipQ8VIG6 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
TraipQ8VIG6 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC21.4■■□□□ 1.02
TraipQ8VIG6 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
TraipQ8VIG6 Gm11421-201ENSMUST00000122124 294 ntBASIC21.4■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms