Protein–RNA interactions for Protein: Q8VI88

Odf4, Outer dense fiber protein 4, mousemouse

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf4Q8VI88 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Odf4Q8VI88 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.78■□□□□ 0.44
Odf4Q8VI88 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
Odf4Q8VI88 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Odf4Q8VI88 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.78■□□□□ 0.44
Odf4Q8VI88 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Odf4Q8VI88 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Odf4Q8VI88 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Odf4Q8VI88 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Odf4Q8VI88 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Odf4Q8VI88 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Odf4Q8VI88 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Odf4Q8VI88 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.78■□□□□ 0.44
Odf4Q8VI88 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.78■□□□□ 0.44
Odf4Q8VI88 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Odf4Q8VI88 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Odf4Q8VI88 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Odf4Q8VI88 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Odf4Q8VI88 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Odf4Q8VI88 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Odf4Q8VI88 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Odf4Q8VI88 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Odf4Q8VI88 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.77■□□□□ 0.44
Odf4Q8VI88 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.77■□□□□ 0.44
Odf4Q8VI88 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC17.77■□□□□ 0.44
Odf4Q8VI88 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Odf4Q8VI88 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Odf4Q8VI88 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.76■□□□□ 0.43
Odf4Q8VI88 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.76■□□□□ 0.43
Odf4Q8VI88 Gm21956-201ENSMUST00000179946 522 ntBASIC17.76■□□□□ 0.43
Odf4Q8VI88 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC17.76■□□□□ 0.43
Odf4Q8VI88 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.76■□□□□ 0.43
Odf4Q8VI88 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Odf4Q8VI88 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Odf4Q8VI88 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
Odf4Q8VI88 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Odf4Q8VI88 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Odf4Q8VI88 Kdm3b-204ENSMUST00000224715 2032 ntBASIC17.76■□□□□ 0.43
Odf4Q8VI88 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Odf4Q8VI88 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Odf4Q8VI88 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Odf4Q8VI88 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Odf4Q8VI88 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Odf4Q8VI88 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Odf4Q8VI88 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Odf4Q8VI88 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Odf4Q8VI88 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.74■□□□□ 0.43
Odf4Q8VI88 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Odf4Q8VI88 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Odf4Q8VI88 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Odf4Q8VI88 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Odf4Q8VI88 Gm12922-201ENSMUST00000120626 809 ntBASIC17.74■□□□□ 0.43
Odf4Q8VI88 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.74■□□□□ 0.43
Odf4Q8VI88 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Odf4Q8VI88 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC17.74■□□□□ 0.43
Odf4Q8VI88 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Odf4Q8VI88 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Odf4Q8VI88 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Odf4Q8VI88 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Odf4Q8VI88 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Odf4Q8VI88 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Odf4Q8VI88 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Odf4Q8VI88 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Odf4Q8VI88 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Odf4Q8VI88 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Odf4Q8VI88 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.73■□□□□ 0.43
Odf4Q8VI88 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.73■□□□□ 0.43
Odf4Q8VI88 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Odf4Q8VI88 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.73■□□□□ 0.43
Odf4Q8VI88 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC17.73■□□□□ 0.43
Odf4Q8VI88 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC17.73■□□□□ 0.43
Odf4Q8VI88 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Odf4Q8VI88 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Odf4Q8VI88 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Odf4Q8VI88 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
Odf4Q8VI88 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Odf4Q8VI88 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Odf4Q8VI88 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.72■□□□□ 0.43
Odf4Q8VI88 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
Odf4Q8VI88 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Odf4Q8VI88 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Odf4Q8VI88 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Odf4Q8VI88 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Odf4Q8VI88 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Odf4Q8VI88 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Odf4Q8VI88 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
Odf4Q8VI88 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Odf4Q8VI88 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Odf4Q8VI88 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Odf4Q8VI88 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Odf4Q8VI88 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Odf4Q8VI88 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Odf4Q8VI88 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Odf4Q8VI88 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Odf4Q8VI88 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.71■□□□□ 0.43
Odf4Q8VI88 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Odf4Q8VI88 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Odf4Q8VI88 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Odf4Q8VI88 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Odf4Q8VI88 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms