Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh18Q8VHR0 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh18Q8VHR0 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh18Q8VHR0 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh18Q8VHR0 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh18Q8VHR0 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.25■□□□□ 0.67
Pcdh18Q8VHR0 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh18Q8VHR0 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh18Q8VHR0 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh18Q8VHR0 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh18Q8VHR0 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh18Q8VHR0 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
Pcdh18Q8VHR0 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh18Q8VHR0 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdh18Q8VHR0 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh18Q8VHR0 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.24■□□□□ 0.67
Pcdh18Q8VHR0 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Pcdh18Q8VHR0 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh18Q8VHR0 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh18Q8VHR0 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh18Q8VHR0 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Pcdh18Q8VHR0 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh18Q8VHR0 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh18Q8VHR0 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Pcdh18Q8VHR0 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.24■□□□□ 0.67
Pcdh18Q8VHR0 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh18Q8VHR0 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.23■□□□□ 0.67
Pcdh18Q8VHR0 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh18Q8VHR0 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh18Q8VHR0 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Pcdh18Q8VHR0 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.23■□□□□ 0.67
Pcdh18Q8VHR0 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh18Q8VHR0 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.22■□□□□ 0.67
Pcdh18Q8VHR0 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh18Q8VHR0 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh18Q8VHR0 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.22■□□□□ 0.67
Pcdh18Q8VHR0 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh18Q8VHR0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.22■□□□□ 0.67
Pcdh18Q8VHR0 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh18Q8VHR0 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh18Q8VHR0 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.22■□□□□ 0.67
Pcdh18Q8VHR0 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh18Q8VHR0 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh18Q8VHR0 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh18Q8VHR0 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Pcdh18Q8VHR0 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Pcdh18Q8VHR0 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh18Q8VHR0 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh18Q8VHR0 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh18Q8VHR0 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh18Q8VHR0 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh18Q8VHR0 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.21■□□□□ 0.67
Pcdh18Q8VHR0 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh18Q8VHR0 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh18Q8VHR0 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.21■□□□□ 0.67
Pcdh18Q8VHR0 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh18Q8VHR0 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh18Q8VHR0 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh18Q8VHR0 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh18Q8VHR0 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh18Q8VHR0 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Pcdh18Q8VHR0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh18Q8VHR0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Pcdh18Q8VHR0 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Pcdh18Q8VHR0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh18Q8VHR0 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh18Q8VHR0 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.2■□□□□ 0.66
Pcdh18Q8VHR0 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Pcdh18Q8VHR0 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh18Q8VHR0 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh18Q8VHR0 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Pcdh18Q8VHR0 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Pcdh18Q8VHR0 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh18Q8VHR0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh18Q8VHR0 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Pcdh18Q8VHR0 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Pcdh18Q8VHR0 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh18Q8VHR0 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.19■□□□□ 0.66
Pcdh18Q8VHR0 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Pcdh18Q8VHR0 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Pcdh18Q8VHR0 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh18Q8VHR0 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.18■□□□□ 0.66
Pcdh18Q8VHR0 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh18Q8VHR0 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Pcdh18Q8VHR0 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh18Q8VHR0 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh18Q8VHR0 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh18Q8VHR0 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.18■□□□□ 0.66
Pcdh18Q8VHR0 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Pcdh18Q8VHR0 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh18Q8VHR0 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh18Q8VHR0 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Pcdh18Q8VHR0 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh18Q8VHR0 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh18Q8VHR0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh18Q8VHR0 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh18Q8VHR0 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh18Q8VHR0 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh18Q8VHR0 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Pcdh18Q8VHR0 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 110.3 ms