Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Rprd1aQ8VDS4 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rprd1aQ8VDS4 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Rprd1aQ8VDS4 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rprd1aQ8VDS4 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rprd1aQ8VDS4 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.68■□□□□ 0.9
Rprd1aQ8VDS4 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Rprd1aQ8VDS4 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rprd1aQ8VDS4 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rprd1aQ8VDS4 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rprd1aQ8VDS4 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Rprd1aQ8VDS4 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
Rprd1aQ8VDS4 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Rprd1aQ8VDS4 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC20.67■□□□□ 0.9
Rprd1aQ8VDS4 Gm27454-201ENSMUST00000185090 204 ntBASIC20.67■□□□□ 0.9
Rprd1aQ8VDS4 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Rprd1aQ8VDS4 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Rprd1aQ8VDS4 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rprd1aQ8VDS4 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rprd1aQ8VDS4 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.66■□□□□ 0.9
Rprd1aQ8VDS4 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC20.66■□□□□ 0.9
Rprd1aQ8VDS4 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Rprd1aQ8VDS4 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rprd1aQ8VDS4 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rprd1aQ8VDS4 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Rprd1aQ8VDS4 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rprd1aQ8VDS4 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rprd1aQ8VDS4 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rprd1aQ8VDS4 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Rprd1aQ8VDS4 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rprd1aQ8VDS4 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rprd1aQ8VDS4 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rprd1aQ8VDS4 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rprd1aQ8VDS4 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rprd1aQ8VDS4 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rprd1aQ8VDS4 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rprd1aQ8VDS4 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Rprd1aQ8VDS4 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rprd1aQ8VDS4 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Rprd1aQ8VDS4 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.65■□□□□ 0.9
Rprd1aQ8VDS4 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rprd1aQ8VDS4 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rprd1aQ8VDS4 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rprd1aQ8VDS4 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Rprd1aQ8VDS4 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.64■□□□□ 0.9
Rprd1aQ8VDS4 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.64■□□□□ 0.89
Rprd1aQ8VDS4 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC20.64■□□□□ 0.89
Rprd1aQ8VDS4 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rprd1aQ8VDS4 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.64■□□□□ 0.89
Rprd1aQ8VDS4 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rprd1aQ8VDS4 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rprd1aQ8VDS4 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rprd1aQ8VDS4 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.63■□□□□ 0.89
Rprd1aQ8VDS4 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rprd1aQ8VDS4 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Rprd1aQ8VDS4 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.63■□□□□ 0.89
Rprd1aQ8VDS4 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rprd1aQ8VDS4 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Rprd1aQ8VDS4 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rprd1aQ8VDS4 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Rprd1aQ8VDS4 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rprd1aQ8VDS4 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Rprd1aQ8VDS4 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rprd1aQ8VDS4 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rprd1aQ8VDS4 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rprd1aQ8VDS4 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rprd1aQ8VDS4 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rprd1aQ8VDS4 Gm43137-201ENSMUST00000198052 594 ntBASIC20.62■□□□□ 0.89
Rprd1aQ8VDS4 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Rprd1aQ8VDS4 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rprd1aQ8VDS4 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Rprd1aQ8VDS4 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rprd1aQ8VDS4 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rprd1aQ8VDS4 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.61■□□□□ 0.89
Rprd1aQ8VDS4 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Rprd1aQ8VDS4 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rprd1aQ8VDS4 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rprd1aQ8VDS4 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.6■□□□□ 0.89
Rprd1aQ8VDS4 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Rprd1aQ8VDS4 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Rprd1aQ8VDS4 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.6■□□□□ 0.89
Rprd1aQ8VDS4 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rprd1aQ8VDS4 Gm45417-201ENSMUST00000209533 758 ntBASIC20.6■□□□□ 0.89
Rprd1aQ8VDS4 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rprd1aQ8VDS4 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rprd1aQ8VDS4 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Rprd1aQ8VDS4 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rprd1aQ8VDS4 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Rprd1aQ8VDS4 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.59■□□□□ 0.89
Rprd1aQ8VDS4 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rprd1aQ8VDS4 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rprd1aQ8VDS4 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rprd1aQ8VDS4 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rprd1aQ8VDS4 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Rprd1aQ8VDS4 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rprd1aQ8VDS4 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rprd1aQ8VDS4 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.58■□□□□ 0.89
Rprd1aQ8VDS4 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.58■□□□□ 0.89
Rprd1aQ8VDS4 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rprd1aQ8VDS4 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms