Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.69■□□□□ 0.9
Sh3kbp1Q8R550 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Sh3kbp1Q8R550 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sh3kbp1Q8R550 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sh3kbp1Q8R550 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.69■□□□□ 0.9
Sh3kbp1Q8R550 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Sh3kbp1Q8R550 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sh3kbp1Q8R550 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
Sh3kbp1Q8R550 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sh3kbp1Q8R550 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sh3kbp1Q8R550 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Sh3kbp1Q8R550 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sh3kbp1Q8R550 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sh3kbp1Q8R550 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Sh3kbp1Q8R550 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sh3kbp1Q8R550 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.68■□□□□ 0.9
Sh3kbp1Q8R550 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.68■□□□□ 0.9
Sh3kbp1Q8R550 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sh3kbp1Q8R550 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Sh3kbp1Q8R550 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.68■□□□□ 0.9
Sh3kbp1Q8R550 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Sh3kbp1Q8R550 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sh3kbp1Q8R550 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sh3kbp1Q8R550 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sh3kbp1Q8R550 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Sh3kbp1Q8R550 Gm43137-201ENSMUST00000198052 594 ntBASIC20.67■□□□□ 0.9
Sh3kbp1Q8R550 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Sh3kbp1Q8R550 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sh3kbp1Q8R550 Gm6139-201ENSMUST00000079261 882 ntBASIC20.67■□□□□ 0.9
Sh3kbp1Q8R550 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sh3kbp1Q8R550 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sh3kbp1Q8R550 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Sh3kbp1Q8R550 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sh3kbp1Q8R550 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sh3kbp1Q8R550 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sh3kbp1Q8R550 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Sh3kbp1Q8R550 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sh3kbp1Q8R550 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Sh3kbp1Q8R550 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sh3kbp1Q8R550 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sh3kbp1Q8R550 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.66■□□□□ 0.9
Sh3kbp1Q8R550 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Sh3kbp1Q8R550 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sh3kbp1Q8R550 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Sh3kbp1Q8R550 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sh3kbp1Q8R550 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sh3kbp1Q8R550 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.65■□□□□ 0.9
Sh3kbp1Q8R550 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.65■□□□□ 0.9
Sh3kbp1Q8R550 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sh3kbp1Q8R550 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sh3kbp1Q8R550 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Sh3kbp1Q8R550 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sh3kbp1Q8R550 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sh3kbp1Q8R550 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Sh3kbp1Q8R550 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Sh3kbp1Q8R550 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
Sh3kbp1Q8R550 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sh3kbp1Q8R550 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Sh3kbp1Q8R550 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
Sh3kbp1Q8R550 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Sh3kbp1Q8R550 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sh3kbp1Q8R550 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sh3kbp1Q8R550 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sh3kbp1Q8R550 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sh3kbp1Q8R550 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sh3kbp1Q8R550 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.63■□□□□ 0.89
Sh3kbp1Q8R550 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sh3kbp1Q8R550 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sh3kbp1Q8R550 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sh3kbp1Q8R550 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sh3kbp1Q8R550 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Sh3kbp1Q8R550 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.62■□□□□ 0.89
Sh3kbp1Q8R550 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Sh3kbp1Q8R550 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Sh3kbp1Q8R550 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.62■□□□□ 0.89
Sh3kbp1Q8R550 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sh3kbp1Q8R550 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Sh3kbp1Q8R550 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sh3kbp1Q8R550 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
Sh3kbp1Q8R550 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sh3kbp1Q8R550 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sh3kbp1Q8R550 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sh3kbp1Q8R550 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Sh3kbp1Q8R550 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sh3kbp1Q8R550 Gm7143-201ENSMUST00000222811 859 ntBASIC20.61■□□□□ 0.89
Sh3kbp1Q8R550 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sh3kbp1Q8R550 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sh3kbp1Q8R550 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sh3kbp1Q8R550 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
Sh3kbp1Q8R550 Mir7075-201ENSMUST00000184187 82 ntBASIC20.6■□□□□ 0.89
Sh3kbp1Q8R550 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Sh3kbp1Q8R550 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sh3kbp1Q8R550 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sh3kbp1Q8R550 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.59■□□□□ 0.89
Sh3kbp1Q8R550 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Sh3kbp1Q8R550 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sh3kbp1Q8R550 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sh3kbp1Q8R550 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sh3kbp1Q8R550 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.59■□□□□ 0.89
Sh3kbp1Q8R550 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 15.7 ms