Protein–RNA interactions for Protein: Q8R1J3

Zcchc9, Zinc finger CCHC domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc9Q8R1J3 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Zcchc9Q8R1J3 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Zcchc9Q8R1J3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Zcchc9Q8R1J3 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.02■□□□□ 0.8
Zcchc9Q8R1J3 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Zcchc9Q8R1J3 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Zcchc9Q8R1J3 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.02■□□□□ 0.8
Zcchc9Q8R1J3 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Zcchc9Q8R1J3 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Zcchc9Q8R1J3 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Zcchc9Q8R1J3 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Zcchc9Q8R1J3 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Zcchc9Q8R1J3 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Zcchc9Q8R1J3 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.02■□□□□ 0.79
Zcchc9Q8R1J3 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Zcchc9Q8R1J3 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Zcchc9Q8R1J3 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Zcchc9Q8R1J3 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Zcchc9Q8R1J3 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
Zcchc9Q8R1J3 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Zcchc9Q8R1J3 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Zcchc9Q8R1J3 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Zcchc9Q8R1J3 Gm10616-201ENSMUST00000205285 2127 ntBASIC20■□□□□ 0.79
Zcchc9Q8R1J3 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Zcchc9Q8R1J3 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Zcchc9Q8R1J3 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Zcchc9Q8R1J3 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20■□□□□ 0.79
Zcchc9Q8R1J3 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20■□□□□ 0.79
Zcchc9Q8R1J3 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20■□□□□ 0.79
Zcchc9Q8R1J3 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20■□□□□ 0.79
Zcchc9Q8R1J3 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Zcchc9Q8R1J3 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Zcchc9Q8R1J3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Zcchc9Q8R1J3 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Zcchc9Q8R1J3 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Zcchc9Q8R1J3 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Zcchc9Q8R1J3 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20■□□□□ 0.79
Zcchc9Q8R1J3 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Zcchc9Q8R1J3 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Zcchc9Q8R1J3 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
Zcchc9Q8R1J3 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Zcchc9Q8R1J3 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC19.99■□□□□ 0.79
Zcchc9Q8R1J3 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC19.99■□□□□ 0.79
Zcchc9Q8R1J3 Gm7160-202ENSMUST00000188519 1027 ntBASIC19.99■□□□□ 0.79
Zcchc9Q8R1J3 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Zcchc9Q8R1J3 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.99■□□□□ 0.79
Zcchc9Q8R1J3 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Zcchc9Q8R1J3 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
Zcchc9Q8R1J3 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Zcchc9Q8R1J3 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Zcchc9Q8R1J3 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Zcchc9Q8R1J3 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Zcchc9Q8R1J3 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Zcchc9Q8R1J3 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Zcchc9Q8R1J3 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Zcchc9Q8R1J3 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
Zcchc9Q8R1J3 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Zcchc9Q8R1J3 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Zcchc9Q8R1J3 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
Zcchc9Q8R1J3 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Zcchc9Q8R1J3 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.97■□□□□ 0.79
Zcchc9Q8R1J3 Cdc34b-202ENSMUST00000188741 1252 ntBASIC19.97■□□□□ 0.79
Zcchc9Q8R1J3 Gm43530-201ENSMUST00000195920 274 ntBASIC19.97■□□□□ 0.79
Zcchc9Q8R1J3 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.97■□□□□ 0.79
Zcchc9Q8R1J3 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Zcchc9Q8R1J3 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Zcchc9Q8R1J3 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Zcchc9Q8R1J3 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.97■□□□□ 0.79
Zcchc9Q8R1J3 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.97■□□□□ 0.79
Zcchc9Q8R1J3 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Zcchc9Q8R1J3 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Zcchc9Q8R1J3 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Zcchc9Q8R1J3 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Zcchc9Q8R1J3 Gm26833-201ENSMUST00000180899 440 ntBASIC19.96■□□□□ 0.79
Zcchc9Q8R1J3 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
Zcchc9Q8R1J3 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Zcchc9Q8R1J3 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Zcchc9Q8R1J3 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.96■□□□□ 0.79
Zcchc9Q8R1J3 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Zcchc9Q8R1J3 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Zcchc9Q8R1J3 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Zcchc9Q8R1J3 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Zcchc9Q8R1J3 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.95■□□□□ 0.78
Zcchc9Q8R1J3 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
Zcchc9Q8R1J3 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Zcchc9Q8R1J3 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Zcchc9Q8R1J3 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Zcchc9Q8R1J3 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Zcchc9Q8R1J3 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Zcchc9Q8R1J3 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Zcchc9Q8R1J3 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Zcchc9Q8R1J3 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Zcchc9Q8R1J3 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Zcchc9Q8R1J3 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Zcchc9Q8R1J3 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Zcchc9Q8R1J3 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Zcchc9Q8R1J3 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Zcchc9Q8R1J3 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Zcchc9Q8R1J3 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Zcchc9Q8R1J3 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 13.2 ms